RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 SOX2P48431 317 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 HERV-K104P61576 105 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 CRHR2Q13324 411 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 USF2Q15853 346 aaPredicted RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 COMMD6Q7Z4G1 85 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 SCAMP4Q969E2 229 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 SLC28A3Q9HAS3 691 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 ACSL6Q9UKU0 697 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 DHDHQ9UQ10 334 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 LAMP1P11279 417 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 CPZQ66K79 652 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 OR10T2Q8NGX3 314 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 SCLYQ96I15 445 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 DPCDQ9BVM2 203 aaPredicted RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 MVB12BQ9H7P6 319 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 KLHL21Q9UJP4 597 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 PCDHGA8Q9Y5G5 932 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 ZNF840PA6NDX5 716 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 AXIN1O15169 862 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 CSTAP01040 98 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 CDK1P06493 297 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 ADH6P28332 368 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 CDKN1CP49918 316 aaPredicted RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 CLECL1Q8IZS7 167 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 FAM46AQ96IP4 442 aaKnown RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 VAPAQ9P0L0 249 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 B4GAT1O43505 415 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 MITFO75030 526 aaPredicted RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 GJB5O95377 273 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 RPS17P08708 135 aaKnown RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 IL4RP24394 825 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 PITPNBP48739 271 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
SNED1-205ENST00000405547 COL28A1Q2UY09 1125 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 POGLUT1Q8NBL1 392 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 ELP5Q8TE02 316 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 EMC3Q9P0I2 261 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 WNT6Q9Y6F9 365 aa12.73□□□□□ -0.37
SNED1-205ENST00000405547 LYRM1O43325 122 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 RPS21P63220 83 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 ATXN7L3Q14CW9 347 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 LRRC37A5PQ49AS3 106 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 METTL11BQ5VVY1 283 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 GPR149Q86SP6 731 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 OR8K5Q8NH50 307 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 PROKR1Q8TCW9 393 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 CD200R1Q8TD46 325 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 RNF121Q9H920 327 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 CUEDC1Q9NWM3 386 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 RNASET2O00584 256 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 GLP1RP43220 463 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 CTSOP43234 321 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 GRM2Q14416 872 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 KATNBL1Q9H079 304 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 TREX1Q9NSU2 369 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 CNOT2Q9NZN8 540 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 BTNL2Q9UIR0 455 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 CPOXP36551 454 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 GPR4P46093 362 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 TAZQ16635 292 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 GAL3ST3Q96A11 431 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 TMEM19Q96HH6 336 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 KLHL9Q9P2J3 617 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 KCNK6Q9Y257 313 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 PIM1P11309 404 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 ZNF14P17017 642 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 RGNQ15493 299 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 SLC14A2Q15849 920 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 LRIT3Q3SXY7 679 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 LRIF1Q5T3J3 769 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 GALNT10Q86SR1 603 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 C16orf78Q8WTQ4 265 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 NUFIP1Q9UHK0 495 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 AK4P27144 223 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 SF3A2Q15428 464 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 CNIH2Q6PI25 160 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 TMEM107Q6UX40 140 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 AUTS2Q8WXX7 1259 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 ZNF559Q9BR84 538 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 TTTY10Q9BZA0 68 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 NANSQ9NR45 359 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 ANKMY1Q9P2S6 941 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 H3BSH0 61 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 TNFRSF10BO14763 440 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 APOC3P02656 99 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 RBMXP38159 391 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 SUOXP51687 545 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 RPS26P62854 115 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 TMEM205Q6UW68 189 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 ZNF440Q8IYI8 595 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 B3GNT7Q8NFL0 401 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 OR4K5Q8NGD3 323 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms