RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZNF628Q5EBL2 1059 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 YOD1Q5VVQ6 348 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 LPCAT4Q643R3 524 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 FAM199XQ6PEV8 388 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 TMEM64Q6YI46 380 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 VTCN1Q7Z7D3 282 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TMEM151BQ8IW70 566 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 LILRA2Q8N149 483 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PQLC1Q8N2U9 271 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC16A11Q8NCK7 471 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ICA1LQ8NDH6 482 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 OR52R1Q8NGF1 315 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SFXN5Q8TD22 340 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ADAMTS15Q8TE58 950 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 MOAP1Q96BY2 351 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SLC47A1Q96FL8 570 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 TMEM19Q96HH6 336 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 MS4A4EQ96PG1 132 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PKP2Q99959 881 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CHID1Q9BWS9 393 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 STRADBQ9C0K7 418 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 SOX17Q9H6I2 414 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 AKIRIN1Q9H9L7 192 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 PRDM9Q9NQV7 894 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 LANCL2Q9NS86 450 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 CCM2LQ9NUG4 571 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 DCAF13Q9NV06 445 aaKnown RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 MAT2BQ9NZL9 334 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PTGFRNQ9P2B2 879 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 IFT80Q9P2H3 777 aaPredicted RBP3.47□□□□□ -1.85
RTN4-208ENST00000404909 PISDQ9UG56 409 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 ANGPT4Q9Y264 503 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 LOXL2Q9Y4K0 774 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 KCNE3Q9Y6H6 103 aa3.47□□□□□ -1.85
RTN4-208ENST00000404909 PMS2P1A4D2B8 440 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 C17orf105B2RV13 164 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 MEN1O00255 615 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 CPNE3O75131 537 aaKnown RBP3.46□□□□□ -1.85
RTN4-208ENST00000404909 GPIP06744 558 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 JMJD7P0C870 316 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 ARAFP10398 606 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 ZNF28P17035 718 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 TGM1P22735 817 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 GCGRP47871 477 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 ANXA11P50995 505 aaKnown RBP3.46□□□□□ -1.85
RTN4-208ENST00000404909 E2F1Q01094 437 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 RBBP4Q09028 425 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 VEZF1Q14119 521 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 NNATQ16517 81 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 GRAMD1BQ3KR37 738 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 INTS11Q5TA45 600 aaKnown RBP3.46□□□□□ -1.85
RTN4-208ENST00000404909 FAM69BQ5VUD6 431 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 REEP3Q6NUK4 255 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 LRRC74BQ6ZQY2 392 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 RAB11FIP2Q7L804 512 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 C16orf62Q7Z3J2 963 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 OR2L13Q8N349 312 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 ANKFN1Q8N957 763 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 STT3BQ8TCJ2 826 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 GPR151Q8TDV0 419 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 NRG4Q8WWG1 115 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 MR1Q95460 341 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 OR1F2PQ96R84 312 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 OR7D2Q96RA2 312 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 SPATA9Q9BWV2 254 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 UGT2B28Q9BY64 529 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 ACTRT3Q9BYD9 372 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 OR8D2Q9GZM6 311 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 VN1R1Q9GZP7 353 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 TMEM38AQ9H6F2 299 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 CXorf21Q9HAI6 301 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 CLK4Q9HAZ1 481 aaKnown RBP3.46□□□□□ -1.85
RTN4-208ENST00000404909 MKKSQ9NPJ1 570 aaPredicted RBP3.46□□□□□ -1.85
RTN4-208ENST00000404909 SLC22A11Q9NSA0 550 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 P2RX2Q9UBL9 471 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 SAMD4AQ9UPU9 718 aaKnown RBP3.46□□□□□ -1.85
RTN4-208ENST00000404909 ERVK-19Q9WJR5 959 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 B3GALT1Q9Y5Z6 326 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 AK5Q9Y6K8 562 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 CLCA3PQ9Y6N3 262 aa3.46□□□□□ -1.85
RTN4-208ENST00000404909 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 IGHV3-20A0A0C4DH32 117 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SPAARA0A1B0GVQ0 90 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 BLACEA4D250 179 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PLOD2O00469 737 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SUV39H1O43463 412 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PRKNO60260 465 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 PLOD3O60568 738 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 LRP3O75074 770 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CSO75390 466 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 KLK3P07288 261 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 HBQ1P09105 142 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 TFPTP0C1Z6 253 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ZGLP1P0C6A0 271 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 UMPSP11172 480 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FGF5P12034 268 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 TNFRSF1BP20333 461 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FASP25445 335 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PEX2P28328 305 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SOX18P35713 384 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms