RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TTMPQ5BVD1 217 aa17.74■□□□□ 0.43
RTN4-207ENST00000402434 RTL4Q6ZR62 310 aa17.74■□□□□ 0.43
RTN4-207ENST00000402434 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.74■□□□□ 0.43
RTN4-207ENST00000402434 FAM98AQ8NCA5 519 aaKnown RBP17.74■□□□□ 0.43
RTN4-207ENST00000402434 TUBGCP3Q96CW5 907 aa17.74■□□□□ 0.43
RTN4-207ENST00000402434 KLRC4-KLRK1H3BQV0 150 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 BCAS2O75934 225 aaPredicted RBP17.73■□□□□ 0.43
RTN4-207ENST00000402434 FBXO45P0C2W1 286 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 GPX3P22352 226 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 TDGF1P3P51864 188 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 MRPL49Q13405 166 aaKnown RBP17.73■□□□□ 0.43
RTN4-207ENST00000402434 PDCD2Q16342 344 aaPredicted RBP17.73■□□□□ 0.43
RTN4-207ENST00000402434 FHL5Q5TD97 284 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 HLA-DQA1Q5Y7H0 255 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 ATG16L1Q676U5 607 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 SULF2Q8IWU5 870 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 TRIM42Q8IWZ5 723 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 DND1Q8IYX4 353 aaKnown RBP17.73■□□□□ 0.43
RTN4-207ENST00000402434 FAM9CQ8IZT9 166 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 FNDC5Q8NAU1 212 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 KAT2AQ92830 837 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 GFM2Q969S9 779 aaKnown RBP17.73■□□□□ 0.43
RTN4-207ENST00000402434 MTERF3Q96E29 417 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 SPACA9Q96E40 222 aaPredicted RBP17.73■□□□□ 0.43
RTN4-207ENST00000402434 MANSC1Q9H8J5 431 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 BCAP29Q9UHQ4 241 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 DTX4Q9Y2E6 619 aa17.73■□□□□ 0.43
RTN4-207ENST00000402434 HIVEP3Q5T1R4 2406 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 A0A087WV62 115 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 ANKUB1A6NFN9 424 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 KLF11O14901 512 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 SLITRK5O94991 958 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 PRPS2P11908 318 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 MST1P26927 711 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 NR0B1P51843 470 aaKnown RBP17.72■□□□□ 0.43
RTN4-207ENST00000402434 EMX2Q04743 252 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 IL23RQ5VWK5 629 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 TAGAPQ8N103 731 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 POGLUT1Q8NBL1 392 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 OR52R1Q8NGF1 315 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 CLHC1Q8NHS4 586 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 AMDHD1Q96NU7 426 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 GLIPR2Q9H4G4 154 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 SH2D2AQ9NP31 389 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 DEPPQ9NTK1 212 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 PNPOQ9NVS9 261 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 PRODH2Q9UF12 536 aa17.72■□□□□ 0.43
RTN4-207ENST00000402434 PLOD2O00469 737 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 AKAP10O43572 662 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 PEX1O43933 1283 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 SASH3O75995 380 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 LRATO95237 230 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 DRD5P21918 477 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 NTSP30990 170 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 FRKP42685 505 aaPredicted RBP17.71■□□□□ 0.43
RTN4-207ENST00000402434 NCBP2P52298 156 aaKnown RBP eCLIP17.71■□□□□ 0.43
RTN4-207ENST00000402434 R3HCC1LQ7Z5L2 792 aaKnown RBP17.71■□□□□ 0.43
RTN4-207ENST00000402434 LRRC34Q8IZ02 419 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 LIX1Q8N485 282 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 CPSF7Q8N684 471 aaKnown RBP17.71■□□□□ 0.43
RTN4-207ENST00000402434 ZFP62Q8NB50 900 aaPredicted RBP17.71■□□□□ 0.43
RTN4-207ENST00000402434 OR7G2Q8NG99 324 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 PPCDCQ96CD2 204 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 C1orf50Q9BV19 199 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 NXF5Q9H1B4 397 aaKnown RBP17.71■□□□□ 0.43
RTN4-207ENST00000402434 AKTIPQ9H8T0 292 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 ASIC5Q9NY37 505 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 NPFFR2Q9Y5X5 522 aa17.71■□□□□ 0.43
RTN4-207ENST00000402434 CLEC18AA5D8T8 446 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 HMGB1P1B2RPK0 211 aaPredicted RBP17.7■□□□□ 0.42
RTN4-207ENST00000402434 IFI6P09912 130 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 PPICP45877 212 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 DCAF7P61962 342 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 OCRLQ01968 901 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 MAD2L1Q13257 205 aaPredicted RBP17.7■□□□□ 0.42
RTN4-207ENST00000402434 PTGR1Q14914 329 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 NTRK2Q16620 822 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 ZNF385BQ569K4 471 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 RNFT1Q5M7Z0 435 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 ANKRD26P1Q6NSI1 321 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 CLEC18BQ6UXF7 455 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 GOLGA6L1Q8N7Z2 621 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 CLEC18CQ8NCF0 446 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 PAQR8Q8TEZ7 354 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 ITPAQ9BY32 194 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 NUF2Q9BZD4 464 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 ANKRA2Q9H9E1 313 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 MEAF6Q9HAF1 191 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 ATP6V1HQ9UI12 483 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 GPR55Q9Y2T6 319 aaPredicted RBP17.7■□□□□ 0.42
RTN4-207ENST00000402434 CHCHD2Q9Y6H1 151 aaPredicted RBP17.7■□□□□ 0.42
RTN4-207ENST00000402434 EML6Q6ZMW3 1958 aa17.7■□□□□ 0.42
RTN4-207ENST00000402434 ACOX3O15254 700 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 PDPK1O15530 556 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 WISP2O76076 250 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 CCL3P10147 92 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 NAGAP17050 411 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 CNR1P21554 472 aa17.69■□□□□ 0.42
RTN4-207ENST00000402434 RPL3P39023 403 aaKnown RBP17.69■□□□□ 0.42
RTN4-207ENST00000402434 MEOX1P50221 254 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms