RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TUBA1CQ9BQE3 449 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 YIPF4Q9BSR8 244 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 PAPOLBQ9NRJ5 636 aaKnown RBP11.51□□□□□ -0.57
CLIP4-203ENST00000401617 GIN1Q9NXP7 522 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 PTGFRNQ9P2B2 879 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 BLOC1S6Q9UL45 172 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 CACNA1IQ9P0X4 2223 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 K7ESF4 209 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 LGI1O95970 557 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 TTKP33981 857 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 CAPZBP47756 277 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 ESRRGP62508 458 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 OLR1P78380 273 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 PMS2P3Q13401 168 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 MAD2L1BPQ15013 274 aaPredicted RBP11.51□□□□□ -0.57
CLIP4-203ENST00000401617 MFSD12Q6NUT3 480 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 CDC73Q6P1J9 531 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 FAM111BQ6SJ93 734 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 GPR141Q7Z602 305 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 TMEFF1Q8IYR6 380 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 PARP8Q8N3A8 854 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 HSPA12BQ96MM6 686 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 ZNF285Q96NJ3 590 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 MS4A4EQ96PG1 132 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 WFDC6Q9BQY6 131 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.51□□□□□ -0.57
CLIP4-203ENST00000401617 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 ADNPQ9H2P0 1102 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 ANKRA2Q9H9E1 313 aa11.51□□□□□ -0.57
CLIP4-203ENST00000401617 NMNAT1Q9HAN9 279 aaPredicted RBP11.51□□□□□ -0.57
CLIP4-203ENST00000401617 ZNF860A6NHJ4 632 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 AQP9O43315 295 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SRPX2O60687 465 aaPredicted RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CCNB2O95067 398 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 GPR75O95800 540 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 ATP1B1P05026 303 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 PROS1P07225 676 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CDH3P22223 829 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 GABRA4P48169 554 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 NUP107P57740 925 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 HNRNPKP61978 463 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 IL5RAQ01344 420 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 IL1RL1Q01638 556 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 GANABQ14697 944 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 ZNF628Q5EBL2 1059 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 XAF1Q6GPH4 301 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 LAIR1Q6GTX8 287 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 Q7L0L9 218 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 B3GNT8Q7Z7M8 397 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 LACC1Q8IV20 430 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 MCATQ8IVS2 390 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 TMEM52Q8NDY8 209 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CNIH3Q8TBE1 160 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 PHF10Q8WUB8 498 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SGCDQ92629 289 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 TANKQ92844 425 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 OTUB1Q96FW1 271 aaPredicted RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SLC35A4Q96G79 324 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CNDP2Q96KP4 475 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 ALPK1Q96QP1 1244 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 NIPSNAP1Q9BPW8 284 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 PINK1Q9BXM7 581 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CHRNA10Q9GZZ6 450 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 POLR1BQ9H9Y6 1135 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 PTTG2Q9NZH5 202 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CALML5Q9NZT1 146 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 C19orf53Q9UNZ5 99 aaPredicted RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 PCDHGA6Q9Y5G7 932 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SPACA6W5XKT8 324 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 A0A087WV62 115 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SLC9B1P1A6NJY1 282 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 DUXAA6NLW8 204 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CASC3O15234 703 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 AHCYL1O43865 530 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SLITRK5O94991 958 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 AGR2O95994 175 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CTSBP07858 339 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 BCKDHBP21953 392 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 RAB38P57729 211 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 RBM45Q8IUH3 476 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 OR4N5Q8IXE1 308 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SPARTQ8N0X7 666 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SHISA5Q8N114 240 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 OR9Q2Q8NGE9 314 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 OR5T3Q8NGG3 340 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 ZNF675Q8TD23 568 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 NMD3Q96D46 503 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 TCTN2Q96GX1 697 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 SPACA7Q96KW9 195 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 CCDC3Q9BQI4 270 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 DUSP21Q9H596 190 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 PAK1IP1Q9NWT1 392 aaPredicted RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 RSL24D1Q9UHA3 163 aaKnown RBP11.5□□□□□ -0.57
CLIP4-203ENST00000401617 A4GNTQ9UNA3 340 aa11.5□□□□□ -0.57
CLIP4-203ENST00000401617 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
CLIP4-203ENST00000401617 SYT5O00445 386 aa11.49□□□□□ -0.57
CLIP4-203ENST00000401617 KIF1CO43896 1103 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms