RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LYNP07948 512 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 PPP2R1BP30154 601 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 GCGRP47871 477 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 MERTKQ12866 999 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 LPAL2Q16609 132 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 ANKRD34AQ69YU3 496 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 TMEM71Q6P5X7 295 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF574Q6ZN55 896 aaPredicted RBP24■■□□□ 1.43
CPNE1-205ENST00000401607 WDR53Q7Z5U6 358 aaPredicted RBP24■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF675Q8TD23 568 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 ADAMTS18Q8TE60 1221 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 APOBEC4Q8WW27 367 aaKnown RBP24■■□□□ 1.43
CPNE1-205ENST00000401607 BARD1Q99728 777 aaKnown RBP24■■□□□ 1.43
CPNE1-205ENST00000401607 SMURF2Q9HAU4 748 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 CUTCQ9NTM9 273 aa24■■□□□ 1.43
CPNE1-205ENST00000401607 GPC6Q9Y625 555 aaPredicted RBP24■■□□□ 1.43
CPNE1-205ENST00000401607 RP1P56715 2156 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 SPTBP11277 2137 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 A0A087WV62 115 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 A0A1W2PQM1 296 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 MAGEA13PA6NCF6 341 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 ARHGAP33O14559 1287 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 SNAP29O95721 258 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 CT62P0C5K7 136 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 CRISP3P54108 245 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 CDC73Q6P1J9 531 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 HIPK1Q86Z02 1210 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 BBS10Q8TAM1 723 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 COL21A1Q96P44 957 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 ANKRD60Q9BZ19 345 aa23.99■■□□□ 1.43
CPNE1-205ENST00000401607 PLOD3O60568 738 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 CER1O95813 267 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 IFI6P09912 130 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 MSL3P1P0C860 447 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SLC35E2P0CK97 266 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 PRKACGP22612 351 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 ERV3-1Q14264 604 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SLC36A3Q495N2 470 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 DGAT2L6Q6ZPD8 337 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF595Q8IYB9 648 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SLC35A4Q96G79 324 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF300Q96RE9 604 aaPredicted RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF607Q96SK3 696 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SH3GLB1Q9Y371 365 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 CLDN16Q9Y5I7 305 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 BLACEA4D250 179 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SLITRK5O94991 958 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 DNAJA1P31689 397 aaKnown RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 CCL7P80098 99 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 PUM1Q14671 1186 aaKnown RBP eCLIP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 FAM214AQ32MH5 1076 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SLC16A11Q8NCK7 471 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 OR51Q1Q8NH59 317 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 CTHRC1Q96CG8 243 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 RBM4BQ9BQ04 359 aaKnown RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 RBM4Q9BWF3 364 aaKnown RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 AMBRA1Q9C0C7 1298 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 GABARAPL1Q9H0R8 117 aa23.98■■□□□ 1.43
CPNE1-205ENST00000401607 IFT80Q9P2H3 777 aaPredicted RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 MRPS33Q9Y291 106 aaKnown RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 SAMHD1Q9Y3Z3 626 aaKnown RBP23.98■■□□□ 1.43
CPNE1-205ENST00000401607 TOX3O15405 576 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-205ENST00000401607 CTNSO60931 367 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 CDC123O75794 336 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-205ENST00000401607 FESP07332 822 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 FPR1P21462 350 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 KCNJ5P48544 419 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 IGLV3-21P80748 117 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-205ENST00000401607 SLC13A2Q13183 592 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 BLMHQ13867 455 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 GNA13Q14344 377 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 LAPTM4AQ15012 233 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 ANGPT1Q15389 498 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 GPAT3Q53EU6 434 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 EXOSC6Q5RKV6 272 aaKnown RBP23.97■■□□□ 1.43
CPNE1-205ENST00000401607 PRAMEF17Q5VTA0 474 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 PRAMEF8Q5VWM4 474 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 PRAMEF7Q5VXH5 474 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 TTLL10Q6ZVT0 673 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 ADAMTS15Q8TE58 950 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 REEP1Q9H902 201 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 PRTFDC1Q9NRG1 225 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 GMEB2Q9UKD1 530 aa23.97■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF749O43361 778 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 RPLP0P05388 317 aaKnown RBP23.96■■□□□ 1.43
CPNE1-205ENST00000401607 THRBP10828 461 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 CHN2P52757 468 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 HEPHL1Q6MZM0 1159 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF501Q96CX3 271 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-205ENST00000401607 ZNF347Q96SE7 839 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 SOX17Q9H6I2 414 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-205ENST00000401607 ADAP2Q9NPF8 381 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 GIN1Q9NXP7 522 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 SEC14L3Q9UDX4 400 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 MAU2Q9Y6X3 613 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 UNC13CQ8NB66 2214 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 A0A0G2JPF8 293 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 HNRNPCL2B2RXH8 293 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 HNRNPCL3B7ZW38 293 aa23.96■■□□□ 1.43
CPNE1-205ENST00000401607 HYAL3O43820 417 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms