RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 RNF38Q9H0F5 515 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 FN3KQ9H479 309 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 HRASLS2Q9NWW9 162 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 NPAP1Q9NZP6 1156 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 RGPD1P0DJD0 1748 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 RGPD5Q99666 1765 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 TRBV2A0A0J9YWF9 115 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CPED1A4D0V7 1026 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF840PA6NDX5 716 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 J3QRK9 145 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ARNTLO00327 626 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF217O75362 1048 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 RFPL2O75678 378 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ETFAP13804 333 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CD34P28906 385 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 DIO3P55073 304 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ARF3P61204 181 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ARF1P84077 181 aaKnown RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CAMK2DQ13557 499 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ARMCX6Q7L4S7 300 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 VWA5B2Q8N398 1253 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 OR5B12Q96R08 314 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 DHRS4Q9BTZ2 278 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 VNN3Q9NY84 501 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 RHCGQ9UBD6 479 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ENPP4Q9Y6X5 453 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 VSTM2BA6NLU5 285 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 EFCAB7A8K855 629 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 KLF8O95600 359 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 EDN1P05305 212 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CRABP1P29762 137 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 THBS2P35442 1172 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 NOVP48745 357 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 VSX2P58304 361 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 NKX3-2P78367 333 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 DOC2AQ14183 400 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ARHGAP19Q14CB8 494 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ALG10BQ5I7T1 473 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 LY6G5CQ5SRR4 150 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 METTL11BQ5VVY1 283 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CES4AQ5XG92 561 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ALKBH2Q6NS38 261 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM107Q6UX40 140 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF704Q6ZNC4 412 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 PROKR1Q8TCW9 393 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CD300LFQ8TDQ1 290 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 TM9SF4Q92544 642 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 SNAPC3Q92966 411 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 SCRN2Q96FV2 425 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 FAIMQ9NVQ4 179 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 TAS2R3Q9NYW6 316 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ENPP5Q9UJA9 477 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CRYBG1Q9Y4K1 1723 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 TCRBV21S2A2A0A5A6 115 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ANKRD28O15084 1053 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 CHRM5P08912 532 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 ACRP10323 421 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 POLR2CP19387 275 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 GNRHRP30968 328 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 SPINT3P49223 89 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 GK2Q14410 553 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 PTPRRQ15256 657 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 RGNQ15493 299 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM225Q6GV28 225 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 PDZD9Q8IXQ8 264 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 OR6C4Q8NGE1 309 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 OR5AK2Q8NH90 309 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 HUS1BQ8NHY5 278 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 IGSF8Q969P0 613 aa7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 MMABQ96EY8 250 aaPredicted RBP7.97□□□□□ -1.13
SPTLC3-201ENST00000399002 UBR2Q8IWV8 1755 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 G3V2L1 256 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 CFIP05156 583 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 AK4P27144 223 aaPredicted RBP7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 SF3A2Q15428 464 aaKnown RBP7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 NTRK2Q16620 822 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 AAK1Q2M2I8 961 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 CDNFQ49AH0 187 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 DPPA4Q7L190 304 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 GRASPQ7Z6J2 395 aaPredicted RBP7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 CNTN4Q8IWV2 1026 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 LAS2Q8IYD9 372 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 PRSS58Q8IYP2 241 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 CPEB1Q9BZB8 566 aaKnown RBP7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF395Q9H8N7 513 aaPredicted RBP7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 ANHXE9PGG2 379 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 H7BY64 318 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 PLD2O14939 933 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 UPK1BO75841 260 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 TRAPPC6AO75865 159 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 STC2O76061 302 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 UGT2B7P16662 529 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 DNASE1P24855 282 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 HOXC13P31276 330 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 OR4D2P58180 307 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 MEF2DQ14814 521 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 C2orf27AQ580R0 203 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 BEST3Q8N1M1 668 aa7.96□□□□□ -1.13
SPTLC3-201ENST00000399002 OR5J2Q8NH18 312 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms