RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 PROK2Q9HC23 129 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 MID1IP1Q9NPA3 183 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 B4GALT7Q9UBV7 327 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 CNOT11Q9UKZ1 510 aaKnown RBP12.33□□□□□ -0.44
VCX3A-202ENST00000398729 LIPGQ9Y5X9 500 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
VCX3A-202ENST00000398729 TRGV5A0A0B4J1U4 118 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 GNG14A0A1W2PPG7 69 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ANKRD33BA6NCL7 494 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 H3BQF6 201 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 PCDH7O60245 1069 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 HCN1O60741 890 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 CELA3AP09093 270 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 DRD2P14416 443 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 CHN1P15882 459 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 S1PR1P21453 382 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 SLCO1A2P46721 670 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 CCT5P48643 541 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 HTR6P50406 440 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 FBXW4P57775 412 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 RPP38P78345 283 aaKnown RBP12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ACSM2AQ08AH3 577 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 CCDC153Q494R4 210 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 EMC4Q5J8M3 183 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ACSM2BQ68CK6 577 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ZYG11AQ6WRX3 759 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 TDRPQ86YL5 185 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 LRRC25Q8N386 305 aaPredicted RBP12.32□□□□□ -0.44
VCX3A-202ENST00000398729 MARVELD2Q8N4S9 558 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.32□□□□□ -0.44
VCX3A-202ENST00000398729 SARAFQ96BY9 339 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 SECISBP2Q96T21 854 aaKnown RBP12.32□□□□□ -0.44
VCX3A-202ENST00000398729 GSTO2Q9H4Y5 243 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ZNF703Q9H7S9 590 aaPredicted RBP12.32□□□□□ -0.44
VCX3A-202ENST00000398729 PFDN4Q9NQP4 134 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 PNPLA3Q9NST1 481 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 QPCTLQ9NXS2 382 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 MAT2BQ9NZL9 334 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 UTS2RQ9UKP6 389 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 ACAD8Q9UKU7 415 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 EMCNQ9ULC0 261 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 GRID1Q9ULK0 1009 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 DLGAP4Q9Y2H0 992 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 TIMM22Q9Y584 194 aa12.32□□□□□ -0.44
VCX3A-202ENST00000398729 DNAJC13O75165 2243 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 SMIM23A6NLE4 172 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 FOXO6A8MYZ6 492 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 G3V2L1 256 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 SNX4O95219 450 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 LRATO95237 230 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 PROCP04070 461 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 RFPL3SP0C7P2 107 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 GPX3P22352 226 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ACVR2AP27037 513 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 SSTR2P30874 369 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 CHRNB4P30926 498 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 CRHR1P34998 444 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 GSTM5P46439 218 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 NAGLUP54802 743 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 RAE1P78406 368 aaKnown RBP12.31□□□□□ -0.44
VCX3A-202ENST00000398729 HMGCS1Q01581 520 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 MGAT2Q10469 447 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 EXOSC7Q15024 291 aaKnown RBP12.31□□□□□ -0.44
VCX3A-202ENST00000398729 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 WLSQ5T9L3 541 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 TMEM198Q66K66 360 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ZNF585AQ6P3V2 769 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 SH2D5Q6ZV89 423 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ACAD11Q709F0 780 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 SAMD14Q8IZD0 417 aaPredicted RBP12.31□□□□□ -0.44
VCX3A-202ENST00000398729 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ADCY4Q8NFM4 1077 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 OR5M9Q8NGP3 310 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 RDH11Q8TC12 318 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 SPPL2AQ8TCT8 520 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 CTHRC1Q96CG8 243 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 CNRIP1Q96F85 164 aaPredicted RBP12.31□□□□□ -0.44
VCX3A-202ENST00000398729 APIPQ96GX9 242 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ZNF597Q96LX8 424 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ZNF681Q96N22 645 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 KCNA7Q96RP8 456 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ACKR4Q9NPB9 350 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 HEY2Q9UBP5 337 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 PRODH2Q9UF12 536 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 PHF3Q92576 2039 aaKnown RBP12.31□□□□□ -0.44
VCX3A-202ENST00000398729 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
VCX3A-202ENST00000398729 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
VCX3A-202ENST00000398729 SERTM1A2A2V5 107 aa12.3□□□□□ -0.44
VCX3A-202ENST00000398729 UBFD1O14562 309 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms