RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR10A4Q9H209 315 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC7A11Q9UPY5 501 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 A0A0U1RQS6 177 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 KLF11O14901 512 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 TBX10O75333 385 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 ACY1Q03154 408 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 TMEM173Q86WV6 379 aaPredicted RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 PACRGLQ8N7B6 248 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 THAP4Q8WY91 577 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 OR5P2Q8WZ92 322 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 ATG5Q9H1Y0 275 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 LIN28AQ9H9Z2 209 aaKnown RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 VSTM2BA6NLU5 285 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SOX30O94993 753 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 C8BP07358 591 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 CD1DP15813 335 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 KCNC4Q03721 635 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 GRB7Q14451 532 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 CHRFAM7AQ494W8 412 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 LRRC37A5PQ49AS3 106 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 GTF2IRD2BQ6EKJ0 949 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 OR4C11Q6IEV9 310 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 GTF2IRD2Q86UP8 949 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 PGAP3Q96FM1 320 aaPredicted RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 PGAM5Q96HS1 289 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 LPAR4Q99677 370 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SMCO3A2RU48 225 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 GGT3PA6NGU5 568 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 MAGEA2P43356 314 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC26A5P58743 744 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 EEF1A1P5Q5VTE0 462 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 OR13C3Q8NGS6 347 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 ISG20Q96AZ6 181 aaKnown RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 CDX2Q99626 313 aaPredicted RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 DPH2Q9BQC3 489 aaPredicted RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 MGAT4BQ9UQ53 548 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 ABOP16442 354 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SFTPDP35247 375 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 E2F1Q01094 437 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 CRYZQ08257 329 aaKnown RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 HNRNPA0Q13151 305 aaKnown RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 IER5LQ5T953 404 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 ALDH16A1Q8IZ83 802 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC37A3Q8NCC5 494 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 OR6C4Q8NGE1 309 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 EHD1Q9H4M9 534 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC39A1Q9NY26 324 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 TMPRSS11EQ9UL52 423 aa13.56□□□□□ -0.24
PCDHA11-201ENST00000398640 F11P03951 625 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SPINT3P49223 89 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 CDKN2DP55273 166 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ABRAXAS2Q15018 415 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SYCE2Q6PIF2 218 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 TCEAL3Q969E4 200 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC6A7Q99884 636 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SOX17Q9H6I2 414 aaPredicted RBP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SLAMF7Q9NQ25 335 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 PCDHB16Q9NRJ7 776 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 TAS2R10Q9NYW0 307 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 KCMF1Q9P0J7 381 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ISPDA4D126 451 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 H3BML4 177 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 EMC8O43402 210 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 PRKCAP17252 672 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 PGCP20142 388 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 AK4P27144 223 aaPredicted RBP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 RGS19P49795 217 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SLC18A2Q05940 514 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 EPHA6Q9UF33 1036 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SSC5DA1L4H1 1573 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ACSL6Q9UKU0 697 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 DHDHQ9UQ10 334 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ZNF451Q9Y4E5 1061 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 A8MV72 311 aaPredicted RBP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 MAP2K4P45985 399 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 FAM189A2Q15884 450 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SIGLEC10Q96LC7 697 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 CSNK1G1Q9HCP0 422 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ENAMQ9NRM1 1142 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 PTTG2Q9NZH5 202 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 MLXQ9UH92 298 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 RNF6Q9Y252 685 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 CCL26Q9Y258 94 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 RRP8O43159 456 aaKnown RBP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 RAD51DO75771 328 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 SFTPBP07988 381 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 MPC1LP0DKB6 136 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ZNF28P17035 718 aa13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 ATF4P18848 351 aaPredicted RBP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 TIA1P31483 386 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCDHA11-201ENST00000398640 EEF1A2Q05639 463 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms