RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 CERS1P27544 350 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 PIGAP37287 484 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 CASP2P42575 452 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 CCNG1P51959 295 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 NAGLUP54802 743 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 CDH13P55290 713 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 IRF8Q02556 426 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 CLCQ05315 142 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 BIKQ13323 160 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 DOC2AQ14183 400 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 E2F2Q14209 437 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 SLBPQ14493 270 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 TBCCQ15814 346 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 HIST2H2ACQ16777 129 aaPredicted RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 FBXL19-AS1Q494R0 122 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 HSP90B2PQ58FF3 399 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 PIGGQ5H8A4 983 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 HIST2H2AA3Q6FI13 130 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 LACC1Q8IV20 430 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 SLC15A4Q8N697 577 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 TMEM52Q8NDY8 209 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 WFDC11Q8NEX6 87 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 NEIL3Q8TAT5 605 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 MGARPQ8TDB4 240 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 ATP6V1E2Q96A05 226 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 WDR34Q96EX3 536 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 PTCD3Q96EY7 689 aaKnown RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 RBM18Q96H35 190 aaKnown RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 ART5Q96L15 291 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 KCNC2Q96PR1 638 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 PAIP2Q9BPZ3 127 aaKnown RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 GATA5Q9BWX5 397 aaPredicted RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 EHD1Q9H4M9 534 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 ZNF395Q9H8N7 513 aaPredicted RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 LYRM4Q9HD34 91 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 MED4Q9NPJ6 270 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
RAB1A-201ENST00000398529 SPRR3Q9UBC9 169 aa13.17□□□□□ -0.3
RAB1A-201ENST00000398529 FREM3P0C091 2139 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
RAB1A-201ENST00000398529 MYOCOSA0A1B0GUC4 107 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 EPPINO95925 133 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 GDF1P27539 372 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 SERPINB3P29508 390 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 TIMP3P35625 211 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 TRPC1P48995 793 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 TRAF3Q13114 568 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 LAPTM5Q13571 262 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 SHEQ5VZ18 495 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 FRMD7Q6ZUT3 714 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 CHSY3Q70JA7 882 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 OR52B6Q8NGF0 335 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 NUBPLQ8TB37 319 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 TRPC4APQ8TEL6 797 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 NUDT8Q8WV74 236 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 SPACA9Q96E40 222 aaPredicted RBP13.16□□□□□ -0.3
RAB1A-201ENST00000398529 QRFPRQ96P65 431 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 DGAT2Q96PD7 388 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 EFCAB11Q9BUY7 163 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 ZNF703Q9H7S9 590 aaPredicted RBP13.16□□□□□ -0.3
RAB1A-201ENST00000398529 ACTR8Q9H981 624 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 BEX4Q9NWD9 120 aaPredicted RBP13.16□□□□□ -0.3
RAB1A-201ENST00000398529 STK38LQ9Y2H1 464 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
RAB1A-201ENST00000398529 CAPN14A8MX76 684 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 H3BQF6 201 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 PPP6CO00743 305 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 NPHS1O60500 1241 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 UGDHO60701 494 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 LDB3O75112 727 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 TRAPPC6AO75865 159 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 OTCP00480 354 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 CD22P20273 847 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 ARL1P40616 181 aaPredicted RBP13.15□□□□□ -0.3
RAB1A-201ENST00000398529 DCAF7P61962 342 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
RAB1A-201ENST00000398529 ZNF791Q3KP31 576 aaPredicted RBP13.15□□□□□ -0.3
RAB1A-201ENST00000398529 PAGE2BQ5JRK9 111 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 PRAMEF20Q5VT98 475 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 LIPJQ5W064 366 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 TMEM198Q66K66 360 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 GRHL2Q6ISB3 625 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 ZCCHC23Q6ZST2 131 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 SLC29A4Q7RTT9 530 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 ZNF321PQ8N8H1 164 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 L3MBTL4Q8NA19 623 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 RELL2Q8NC24 303 aaPredicted RBP13.15□□□□□ -0.3
RAB1A-201ENST00000398529 TNIP2Q8NFZ5 429 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 PAQR8Q8TEZ7 354 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
RAB1A-201ENST00000398529 ZNF382Q96SR6 550 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 CSF3RQ99062 836 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms