RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ADAP00813 363 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CYP17A1P05093 508 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3HP0C7X1 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CD53P19397 219 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CSNK2A2P19784 350 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CD6P30203 668 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 RBBP4Q09028 425 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 LIPKQ5VXJ0 399 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3GQ6DHY5 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3CQ6IPX1 549 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM107Q6UX40 140 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 C19orf35Q6ZS72 473 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 WDR53Q7Z5U6 358 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TECPR1Q7Z6L1 1165 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SLC9B2Q86UD5 537 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TBC1D3Q8IZP1 549 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL6Q8WZ60 621 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 HRASLS5Q96KN8 279 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CAMK1GQ96NX5 476 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MCHR1Q99705 422 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NEURL2Q9BR09 285 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZDHHC5Q9C0B5 715 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MRPS30Q9NP92 439 aaKnown RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PHPT1Q9NRX4 125 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 IL20RAQ9UHF4 553 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 B3GNT3Q9Y2A9 372 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KNTC1P50748 2209 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 H0YIV9 168 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 EIF3FO00303 357 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PPM1DO15297 605 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL18O94889 574 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NT5EP21589 574 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CHMP24386 653 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 NKX3-2P78367 333 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF234Q14588 700 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 AKIRIN2Q53H80 203 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 UBE2UQ5VVX9 321 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 REEP3Q6NUK4 255 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FAHD1Q6P587 224 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PODNL1Q6PEZ8 512 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 PLPP6Q8IY26 295 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 UXS1Q8NBZ7 420 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 OR4E2Q8NGC2 313 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 RNFT2Q96EX2 444 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 TMED9Q9BVK6 235 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MND1Q9BWT6 205 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 SLC6A16Q9GZN6 736 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 P2RX2Q9UBL9 471 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CLEC2DQ9UHP7 191 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 HCFC2Q9Y5Z7 792 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 CCRL2O00421 344 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ADAM23O75077 832 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 BIDP55957 195 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 FAM92BQ6ZTR7 304 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 ADIPOR2Q86V24 386 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 LRRTM4Q86VH4 590 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 LYSMD2Q8IV50 215 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 BADQ92934 168 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 LYSMD1Q96S90 227 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 MVB12BQ9H7P6 319 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 HS3ST2Q9Y278 367 aa4.68□□□□□ -1.66
SMAD4-202ENST00000398417 A0A0G2JPF8 293 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LRRC72A6NJI9 287 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OR52A4PA6NMU1 304 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ARHGAP33O14559 1287 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CAPN5O15484 640 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 C1orf105O95561 183 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TUBA1BP68363 451 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 FAM214AQ32MH5 1076 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 IDNKQ5T6J7 187 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 STEAP3Q658P3 488 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 C22orf42Q6IC83 251 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LCTLQ6UWM7 567 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TUBA1AQ71U36 451 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 DTD2Q96FN9 168 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SLC38A2Q96QD8 506 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MKRN2Q9H000 416 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 WDR26Q9H7D7 661 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NEK6Q9HC98 313 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL42Q9P2K6 505 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NDOR1Q9UHB4 597 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NTNG1Q9Y2I2 539 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OR1A2Q9Y585 309 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PCDHGB6Q9Y5F9 930 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TDRD6O60522 2096 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF860A6NHJ4 632 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 KHNYNO15037 678 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SLC31A1O15431 190 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CSO75390 466 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NCR1O76036 304 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NTN1O95631 604 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OLFM2O95897 454 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 FURINP09958 794 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CMPK1P30085 196 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 RPS25P62851 125 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TAP2Q03519 686 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 METTL2BQ6P1Q9 378 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 C7orf61Q8IZ16 206 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CADM2Q8N3J6 435 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OR4C15Q8NGM1 316 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms