RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 VMP1Q96GC9 406 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 SENP5Q96HI0 755 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-203ENST00000398137 FBXL20Q96IG2 436 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 ART5Q96L15 291 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 TEX37Q96LM6 180 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 AMDHD1Q96NU7 426 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 EPS8L2Q9H6S3 715 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 MAT2BQ9NZL9 334 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 PTGFRNQ9P2B2 879 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 COPS7AQ9UBW8 275 aa23.61■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF223Q9UK11 482 aaPredicted RBP23.61■■□□□ 1.37
U2AF1-203ENST00000398137 SPTBN1Q01082 2364 aaKnown RBP23.6■■□□□ 1.37
U2AF1-203ENST00000398137 MPIP34949 423 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 CLNS1AP54105 237 aaKnown RBP23.6■■□□□ 1.37
U2AF1-203ENST00000398137 AP2B1P63010 937 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 PRICKLE4Q2TBC4 344 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 PGS1Q32NB8 556 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 VWA5B2Q8N398 1253 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 OR1N1Q8NGS0 311 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 ELP5Q8TE02 316 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 PRPF18Q99633 342 aaKnown RBP23.6■■□□□ 1.37
U2AF1-203ENST00000398137 FAM107BQ9H098 131 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 GLIPR2Q9H4G4 154 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 ATAD3AQ9NVI7 634 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 PLA2G3Q9NZ20 509 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 ERRFI1Q9UJM3 462 aaPredicted RBP23.6■■□□□ 1.37
U2AF1-203ENST00000398137 MAPRE3Q9UPY8 281 aa23.6■■□□□ 1.37
U2AF1-203ENST00000398137 PCSK2P16519 638 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 SSTR4P31391 388 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 CLCN2P51788 898 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 ARFIP2P53365 341 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 STX1BP61266 288 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 MRPS35P82673 323 aaKnown RBP23.59■■□□□ 1.37
U2AF1-203ENST00000398137 MGAT2Q10469 447 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 HSPB3Q12988 150 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 TLR1Q15399 786 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF628Q5EBL2 1059 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF551Q7Z340 670 aaPredicted RBP23.59■■□□□ 1.37
U2AF1-203ENST00000398137 ZNF675Q8TD23 568 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 GRHL3Q8TE85 626 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 KAT2AQ92830 837 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 COQ8BQ96D53 544 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 SDR39U1Q9NRG7 319 aaPredicted RBP23.59■■□□□ 1.37
U2AF1-203ENST00000398137 KLHL14Q9P2G3 628 aa23.59■■□□□ 1.37
U2AF1-203ENST00000398137 POLEQ07864 2286 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 ANKUB1A6NFN9 424 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 WIPF3A6NGB9 483 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 IGKV3-11P04433 115 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 IL12AP29459 219 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 FCRLBQ6BAA4 426 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 CAMKMTQ7Z624 323 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 MIER2Q8N344 545 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 ZFP28Q8NHY6 868 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 TESCQ96BS2 214 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 ZBED6CLQ96FA7 236 aaPredicted RBP23.58■■□□□ 1.37
U2AF1-203ENST00000398137 ZBTB18Q99592 522 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 DUSP26Q9BV47 211 aa23.58■■□□□ 1.37
U2AF1-203ENST00000398137 NSRP1Q9H0G5 558 aaKnown RBP23.58■■□□□ 1.37
U2AF1-203ENST00000398137 GMNCA6NCL1 334 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 A8MUI8 341 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 PRKNO60260 465 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-203ENST00000398137 CLPSP04118 112 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 DRD4P21917 467 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 SOX18P35713 384 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 FRKP42685 505 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-203ENST00000398137 FUT7Q11130 342 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 MAP4K2Q12851 820 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 EXOSC7Q15024 291 aaKnown RBP23.57■■□□□ 1.36
U2AF1-203ENST00000398137 FAM174BQ3ZCQ3 159 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 SPANXN4Q5MJ08 99 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 OR4F3Q6IEY1 312 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 PAOXQ6QHF9 649 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 TMEM107Q6UX40 140 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 RNF111Q6ZNA4 994 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 OR9I1Q8NGQ6 314 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 THAP3Q8WTV1 239 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-203ENST00000398137 DEFB126Q9BYW3 111 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 BHLHE41Q9C0J9 482 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-203ENST00000398137 ANKRA2Q9H9E1 313 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 ACSS1Q9NUB1 689 aaPredicted RBP23.57■■□□□ 1.36
U2AF1-203ENST00000398137 ZIM2Q9NZV7 527 aa23.57■■□□□ 1.36
U2AF1-203ENST00000398137 SLC22A3O75751 556 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 F10P00742 488 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 NCF2P19878 526 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-203ENST00000398137 S1PR1P21453 382 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 MC3RP41968 323 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 KIR3DL1P43629 444 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 TNFSF10P50591 281 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 MANFP55145 182 aaKnown RBP23.56■■□□□ 1.36
U2AF1-203ENST00000398137 SLC37A1P57057 533 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 TRMT12Q53H54 448 aaKnown RBP23.56■■□□□ 1.36
U2AF1-203ENST00000398137 HSDL2Q6YN16 418 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 SLC5A8Q8N695 610 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 ST6GALNAC3Q8NDV1 305 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 SIMC1Q8NDZ2 872 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 C10orf82Q8WW14 230 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 HAS2Q92819 552 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 CTHRC1Q96CG8 243 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 RABEP2Q9H5N1 569 aa23.56■■□□□ 1.36
U2AF1-203ENST00000398137 TRIM33Q9UPN9 1127 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms