RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GABRR2P28476 465 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 SSTR4P31391 388 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 MAP2K6P52564 334 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 LIM2P55344 173 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 MADCAM1Q13477 382 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 CRB2Q5IJ48 1285 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 SPOUT1Q5T280 376 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 TOX2Q96NM4 488 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 CLEC4MQ9H2X3 399 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 RERGLQ9H628 205 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 FOLH1BQ9HBA9 442 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 RC3H2Q9HBD1 1191 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 GMEB2Q9UKD1 530 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 ANGPT4Q9Y264 503 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 OBSL1O75147 1896 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 LAMA2P24043 3122 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 INMT-MINDY4F8WBC2 141 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 FFAR1O14842 300 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 MPZL2O60487 215 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 CDRT1O95170 752 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 POP4O95707 220 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 IFNA14P01570 189 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 RHCEP18577 417 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 HMGA2P52926 109 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 LRRC74AQ0VAA2 488 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 EXOSC2Q13868 293 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF273Q14593 569 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF630Q2M218 657 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 PAQR6Q6TCH4 344 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 CFAP77Q6ZQR2 320 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 TMCO2Q7Z6W1 182 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 ATP6V1C2Q8NEY4 427 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 OR56A3Q8NH54 315 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 C16orf78Q8WTQ4 265 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 UFD1Q92890 307 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM169Q96HH4 297 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF558Q96NG5 402 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 RNF208Q9H0X6 261 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 MCCC2Q9HCC0 563 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 ENOPH1Q9UHY7 261 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 INSL5Q9Y5Q6 135 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
CHMP1A-201ENST00000397901 H3BN98 237 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 NPC1O15118 1278 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PLOD3O60568 738 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 TP53P04637 393 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 KLK1P06870 262 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 CHRM5P08912 532 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 ARAFP10398 606 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 CCL5P13501 91 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PCBP3P57721 371 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 TBPL1P62380 186 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PUM1Q14671 1186 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 POM121L1PQ3SYA9 428 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF770Q6IQ21 691 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 Q8N402 240 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 LRRC17Q8N6Y2 441 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 RASGEF1AQ8N9B8 481 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.12■□□□□ 0.015e-11■■■■■ 32.7
CHMP1A-201ENST00000397901 RIT1Q92963 219 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PHF21AQ96BD5 680 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 CXorf40BQ96DE9 158 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 MTERF3Q96E29 417 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 SORBS1Q9BX66 1292 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PLEKHB1Q9UF11 243 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 TBX21Q9UL17 535 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 HS3ST2Q9Y278 367 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 LSM2Q9Y333 95 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 A0A1W2PRB8 838 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 OLFM2O95897 454 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 CLEC2LP0C7M8 214 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 HNRNPA0Q13151 305 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 ELOAQ14241 798 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 GNA13Q14344 377 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 SF3A2Q15428 464 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 SEC23BQ15437 767 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 SPHARQ15513 63 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 BICRALQ6AI39 1079 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 GDPD4Q6W3E5 623 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 LAS2Q8IYD9 372 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 TCEAL8Q8IYN2 117 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 CELF5Q8N6W0 485 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 PTP4A1Q93096 173 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 CREB3L1Q96BA8 519 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 DPCDQ9BVM2 203 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 ANKRA2Q9H9E1 313 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC25A19Q9HC21 320 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 ZFP64Q9NPA5 681 aa15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 MRPL17Q9NRX2 175 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-201ENST00000397901 NRG2O14511 850 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF197O14709 1029 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 URODP06132 367 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 BMP8BP34820 402 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 BTG1P62324 171 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 RPA4Q13156 261 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 FGFBP1Q14512 234 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 LIPKQ5VXJ0 399 aa15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 ASTLQ6HA08 431 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-201ENST00000397901 TNFAIP8L2Q6P589 184 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms