RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CDK6Q00534 326 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 HACD4Q5VWC8 232 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 RTN4RL1Q86UN2 441 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TCEANCQ8N8B7 351 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OR7G3Q8NG95 312 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OR4C15Q8NGM1 316 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CD300LFQ8TDQ1 290 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 DNASE1L2Q92874 299 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 EXOSC8Q96B26 276 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TAPBPLQ9BX59 468 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OR10A4Q9H209 315 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 RHBGQ9H310 441 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 LRRN3Q9H3W5 708 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 UPB1Q9UBR1 384 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 A0A1W2PQL4 384 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 A0A1W2PRB8 838 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FAM86C2PA6NEL3 165 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 STMND1H3BQB6 276 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FAAHO00519 579 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PRRG1O14668 218 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PRKYO43930 277 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CH25HO95992 272 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PKLRP30613 574 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 GDF5P43026 501 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SPINT3P49223 89 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CCR4P51679 360 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SLC3A1Q07837 685 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 RGNQ15493 299 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ESCO2Q56NI9 601 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CEP68Q76N32 757 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FAM110BQ8TC76 370 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM169Q96HH4 297 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 IGSF21Q96ID5 467 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 MAP6Q96JE9 813 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PIP5K1AQ99755 562 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OR51V1Q9H2C8 321 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 REEP4Q9H6H4 257 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 IL21Q9HBE4 155 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PRDM9Q9NQV7 894 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 MED17Q9NVC6 651 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CDC40O60508 579 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 MMP20O60882 483 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FARS2O95363 451 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 XCR1P46094 333 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ETV1P50549 477 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 BDH1Q02338 343 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PTPRCAPQ14761 206 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CLPPQ16740 277 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FAM205BPQ63HN1 556 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ELP2Q6IA86 826 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 UBQLNLQ8IYU4 475 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SAMD14Q8IZD0 417 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZSCAN1Q8NBB4 408 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PLA2G15Q8NCC3 412 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OR2T35Q8NGX2 323 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SH3RF2Q8TEC5 729 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ARMC5Q96C12 935 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PFDN5Q99471 154 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PCBD2Q9H0N5 130 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 DPEP2Q9H4A9 486 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OSGEPL1Q9H4B0 414 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZFR2Q9UPR6 939 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 A0A1B0GTQ1 180 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CD8B2A6NJW9 211 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 STK25O00506 426 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 PRH1P02810 166 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 IFNA6P05013 189 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CD8BP10966 210 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 OR1D2P34982 312 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 DDOSTP39656 456 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 HTR3AP46098 478 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FLT3LGP49771 235 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 MLLT11Q13015 90 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 GNA13Q14344 377 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 C3orf38Q5JPI3 329 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 C22orf39Q6P5X5 142 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SLCO4C1Q6ZQN7 724 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF551Q7Z340 670 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 IFNL1Q8IU54 200 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CFAP52Q8N1V2 620 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 FAM46DQ8NEK8 389 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TMIEQ8NEW7 156 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 RPLP0P6Q8NHW5 317 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 C1orf216Q8TAB5 229 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 BCL7CQ8WUZ0 217 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SGPP1Q9BX95 441 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 USP22Q9UPT9 525 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SLC5A10A0PJK1 596 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ANXA2P2A6NMY6 339 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 WASHC1A8K0Z3 465 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CASC3O15234 703 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ANXA2P07355 339 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TNFSF8P32971 234 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 LIPAP38571 399 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SOX3P41225 446 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 YBX1P67809 324 aaKnown RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 DOC2AQ14183 400 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 CHRNA6Q15825 494 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 LRRC26Q2I0M4 334 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 SCGB2B2Q4G0G5 96 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms