RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TMEM107Q6UX40 140 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF227Q86WZ6 799 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF441Q8N8Z8 693 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 OR7G2Q8NG99 324 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 ERP27Q96DN0 273 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 MAGEB18Q96M61 343 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 ITPAQ9BY32 194 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 MED4Q9NPJ6 270 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 ERVK-11Q9UQG0 969 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 CFL2Q9Y281 166 aa19.6■□□□□ 0.73
TSPAN4-206ENST00000397408 ATP8B1O43520 1251 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 NADKO95544 446 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 PLA2G2AP14555 144 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 PRPS1L1P21108 318 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 MC3RP41968 323 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 NR0B1P51843 470 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 HSPB3Q12988 150 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 SLC9B1Q4ZJI4 515 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 RPUSD3Q6P087 351 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 OPN5Q6U736 354 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 IL20RBQ6UXL0 311 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 FAM47EQ6ZV65 393 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF551Q7Z340 670 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 GPALPP1Q8IXQ4 340 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 ZFP28Q8NHY6 868 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 NUDT8Q8WV74 236 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 TMEM125Q96AQ2 219 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 SNRNP40Q96DI7 357 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 ZBED6CLQ96FA7 236 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 SCMH1Q96GD3 660 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 USH1CQ9Y6N9 552 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 PLOD3O60568 738 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 BCAS2O75934 225 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 SLITRK5O94991 958 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 SP1P08047 785 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 EFNA1P20827 205 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 CLDN8P56748 225 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 INAQ16352 499 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 NNATQ16517 81 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 FHL5Q5TD97 284 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 NXNQ6DKJ4 435 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 SLC25A25Q6KCM7 469 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 GALNTL5Q7Z4T8 443 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 TMEM178AQ8NBL3 297 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 ADIPOR1Q96A54 375 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 MAELQ96JY0 434 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 PRODH2Q9UF12 536 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 NTNG1Q9Y2I2 539 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 PCDHGB6Q9Y5F9 930 aa19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 COPG1Q9Y678 874 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-206ENST00000397408 ZNF195O14628 629 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 DIAPH2O60879 1101 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 ALDOCP09972 364 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 LAMP1P11279 417 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 GPC1P35052 558 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 FRKP42685 505 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 EMDP50402 254 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 C21orf58P58505 322 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 MAPKAPK3Q16644 382 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 CPTPQ5TA50 214 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 MDGA2Q7Z553 956 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 RIMKLAQ8IXN7 391 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 TAGAPQ8N103 731 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 SLC15A4Q8N697 577 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 ARFGAP2Q8N6H7 521 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 TP53INP1Q96A56 240 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 PRPF18Q99633 342 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 ACSS1Q9NUB1 689 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 ATAD3AQ9NVI7 634 aa19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 DDX18Q9NVP1 670 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 RP1L1Q8IWN7 2480 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-206ENST00000397408 SHANK1Q9Y566 2161 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 A0A087WV62 115 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 PYCARD-AS1I3L0S3 204 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 PLOD2O00469 737 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 NME2P1O60361 137 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 COQ9O75208 318 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 RASAL1O95294 804 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 NME2P22392 152 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 MANFP55145 182 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 FAM180AQ6UWF9 173 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 LYPD8Q6UX82 237 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 RGS9BPQ6ZS82 235 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 SPATA19Q7Z5L4 167 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 C17orf47Q8NEP4 570 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 ELP4Q96EB1 424 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 MAGED4Q96JG8 741 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 TAAR6Q96RI8 345 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 DPY30Q9C005 99 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 NXF5Q9H1B4 397 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 ASF1BQ9NVP2 202 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 AIG1Q9NVV5 245 aa19.57■□□□□ 0.72
TSPAN4-206ENST00000397408 FASNP49327 2511 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 UPK1AO00322 258 aa19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 NME6O75414 186 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 CDK9P50750 372 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 PMP22Q01453 160 aa19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 ZNF155Q12901 538 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 TMEM64Q6YI46 380 aa19.56■□□□□ 0.72
TSPAN4-206ENST00000397408 RTL4Q6ZR62 310 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms