RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZCCHC3Q9NUD5 404 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 TAGLN3Q9UI15 199 aa21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 C19orf53Q9UNZ5 99 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-203ENST00000397397 ZZEF1O43149 2961 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 URB1O60287 2271 aaKnown RBP21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 ACACAQ13085 2346 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 CCT8L1PA6NM43 557 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 BCAS2O75934 225 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 CLPSP04118 112 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 UQCRC2P22695 453 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 ITPKBP27987 946 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 PRKAG1P54619 331 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 PRR5P85299 388 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 NFYCQ13952 458 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 CLEC4FQ8N1N0 589 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 PCYOX1LQ8NBM8 494 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 NUP43Q8NFH3 380 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 SFXN5Q8TD22 340 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 IL1RL2Q9HB29 575 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 MAP10Q9P2G4 905 aa21.96■■□□□ 1.11
TSPAN4-203ENST00000397397 RNF103-CHMP3A0A140T963 221 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 ARGFXA6NJG6 315 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 COQ9O75208 318 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 ERN1O75460 977 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 CELA2AP08217 269 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 ICAM2P13598 275 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 CLCN2P51788 898 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 SLC37A1P57057 533 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 DUSP8Q13202 625 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 GAB1Q13480 694 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 GTDC1Q4AE62 458 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 DCAF10Q5QP82 559 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 DHDDSQ86SQ9 333 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 ZNF615Q8N8J6 731 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 APCDD1LQ8NCL9 501 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 MOAP1Q96BY2 351 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 SLC35A5Q9BS91 424 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 SEMA4CQ9C0C4 833 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 MMP25Q9NPA2 562 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 SLC6A13Q9NSD5 602 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 SLAMF8Q9P0V8 285 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 NTMQ9P121 344 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 CELSR3Q9NYQ7 3312 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 CACNA1BQ00975 2339 aa21.95■■□□□ 1.1
TSPAN4-203ENST00000397397 TRBV11-1A0A0K0K1C0 115 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 AIM2O14862 343 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 PRAMEF2O60811 474 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 CBX6O95503 412 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 ZCCHC18P0CG32 403 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 PTPN6P29350 595 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 CHI3L1P36222 383 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 CPA2P48052 419 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 RRADP55042 308 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 UCNP55089 124 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 TP53BP2Q13625 1128 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 DEFB109BQ30KR1 87 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 LRIF1Q5T3J3 769 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 C19orf48Q6RUI8 117 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 KBTBD2Q8IY47 623 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 KIF2BQ8N4N8 673 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 OR56A1Q8NGH5 318 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 DNAJB8Q8NHS0 232 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 NSL1Q96IY1 281 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 PHF12Q96QT6 1004 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 EFCAB1Q9HAE3 211 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 CPNE5Q9HCH3 593 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 ATP13A2Q9NQ11 1180 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 ZNF223Q9UK11 482 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 PCDHB14Q9Y5E9 798 aa21.94■■□□□ 1.1
TSPAN4-203ENST00000397397 A0A087WV48 116 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 TMPRSS3P57727 454 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 Q0VFX4 171 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 BHLHB9Q6PI77 547 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 DLEU7Q6UYE1 221 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 TMEM102Q8N9M5 508 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 ELP5Q8TE02 316 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 MS4A4EQ96PG1 132 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 EQTNQ9NQ60 294 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 GID8Q9NWU2 228 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 PRODH2Q9UF12 536 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 LAMA5O15230 3695 aa21.93■■□□□ 1.1
TSPAN4-203ENST00000397397 OR6C76A6NM76 312 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 NME6O75414 186 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 SERPINA7P05543 415 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 ESRRAP11474 423 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 HOXB9P17482 250 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 EMDP50402 254 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 AIMP2Q13155 320 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 TRMT5Q32P41 509 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 HSDL2Q6YN16 418 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 SLC29A4Q7RTT9 530 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 C6orf120Q7Z4R8 191 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 CLEC1AQ8NC01 280 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 C16orf52Q8NHV5 167 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 SLC25A37Q9NYZ2 338 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 VAPAQ9P0L0 249 aa21.92■■□□□ 1.1
TSPAN4-203ENST00000397397 CFL2Q9Y281 166 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms