RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 CFLARO15519 480 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 PRKNO60260 465 aaPredicted RBP15.24■□□□□ 0.03
AP1S3-202ENST00000396653 KCNK10P57789 538 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 MLF1P58340 268 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 SF3A3Q12874 501 aaKnown RBP eCLIP15.24■□□□□ 0.03
AP1S3-202ENST00000396653 DUSP8Q13202 625 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 KCNAB2Q13303 367 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 MFAP5Q13361 173 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 EXOSC7Q15024 291 aaKnown RBP15.24■□□□□ 0.03
AP1S3-202ENST00000396653 TCTN3Q6NUS6 607 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 BLOC1S3Q6QNY0 202 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 IGFL2Q6UWQ7 119 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 PIGWQ7Z7B1 504 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 RPS19BP1Q86WX3 136 aaKnown RBP15.24■□□□□ 0.03
AP1S3-202ENST00000396653 SIRT6Q8N6T7 355 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 SFXN5Q8TD22 340 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 DOK4Q8TEW6 326 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 TSPEARQ8WU66 669 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 MOAP1Q96BY2 351 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 OR52E6Q96RD3 313 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 LMF1Q96S06 567 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 WWTR1Q9GZV5 400 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 RNF32Q9H0A6 362 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 C3orf14Q9HBI5 128 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 SAR1AQ9NR31 198 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 TAS2R9Q9NYW1 312 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 CCDC167Q9P0B6 97 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 ABI3Q9P2A4 366 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 BCAP29Q9UHQ4 241 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 PCDHGB4Q9UN71 923 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 ZNF451Q9Y4E5 1061 aa15.24■□□□□ 0.03
AP1S3-202ENST00000396653 TMEM200CA6NKL6 621 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 TTC36A6NLP5 189 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 UPK1AO00322 258 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 FCHO1O14526 889 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 EMC8O43402 210 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 CCDC22O60826 627 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 FAM107AO95990 144 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 SFTPCP11686 197 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 EFNA1P20827 205 aaPredicted RBP15.23■□□□□ 0.03
AP1S3-202ENST00000396653 EMDP50402 254 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 DGKQP52824 942 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 DCAF7P61962 342 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 HBA1P69905 142 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 PRR5P85299 388 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 AGKQ53H12 422 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 ABHD17BQ5VST6 288 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 ZNF441Q8N8Z8 693 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 GOT1L1Q8NHS2 421 aaPredicted RBP15.23■□□□□ 0.03
AP1S3-202ENST00000396653 C16orf52Q8NHV5 167 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 TP53INP1Q96A56 240 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 SPDL1Q96EA4 605 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 ABHD17AQ96GS6 310 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 MS4A4EQ96PG1 132 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 NPAS2Q99743 824 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 EPS8L2Q9H6S3 715 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 RMND5AQ9H871 391 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 MYOTQ9UBF9 498 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
AP1S3-202ENST00000396653 CACNA1BQ00975 2339 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 CFAP47Q6ZTR5 3102 aa15.23■□□□□ 0.03
AP1S3-202ENST00000396653 C2orf92A0A1B0GVN3 265 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 A8MUI8 341 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 PSPHP78330 225 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 RAPSNQ13702 412 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 TIGD2Q4W5G0 525 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 ACER2Q5QJU3 275 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 HLA-DQA1Q5Y7H0 255 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 B3GNTL1Q67FW5 361 aaPredicted RBP15.22■□□□□ 0.03
AP1S3-202ENST00000396653 IGFL3Q6UXB1 125 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
AP1S3-202ENST00000396653 ANKRD46Q86W74 232 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 SLC15A4Q8N697 577 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 SIMC1Q8NDZ2 872 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 NUP43Q8NFH3 380 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 OR56A1Q8NGH5 318 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 OR4A15Q8NGL6 344 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 C9orf43Q8TAL5 461 aaPredicted RBP15.22■□□□□ 0.03
AP1S3-202ENST00000396653 TM9SF4Q92544 642 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 ADIPOR1Q96A54 375 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 FAM120BQ96EK7 910 aaKnown RBP15.22■□□□□ 0.03
AP1S3-202ENST00000396653 VSTM2LQ96N03 204 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 GAL3ST4Q96RP7 486 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 CCT8L2Q96SF2 557 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 TRIM4Q9C037 500 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 CDCP1Q9H5V8 836 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 CXorf36Q9H7Y0 433 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 LHX6Q9UPM6 363 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 YARS2Q9Y2Z4 477 aaKnown RBP15.22■□□□□ 0.03
AP1S3-202ENST00000396653 EPG5Q9HCE0 2579 aa15.22■□□□□ 0.03
AP1S3-202ENST00000396653 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 CCDC154A6NI56 674 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 NR5A2O00482 541 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 ABCB1P08183 1280 aaPredicted RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 FAM87AP0C7U9 286 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 TRHRP34981 398 aaPredicted RBP15.21■□□□□ 0.03
AP1S3-202ENST00000396653 MAPRE2Q15555 327 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 MAPKAPK3Q16644 382 aa15.21■□□□□ 0.03
AP1S3-202ENST00000396653 FCRLBQ6BAA4 426 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms