RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 YARS2Q9Y2Z4 477 aaKnown RBP17.8■□□□□ 0.44
HOXA9-202ENST00000396345 SPTA1P02549 2419 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 BOD1L1Q8NFC6 3051 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 A0A087WV62 115 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 CDK2AP1O14519 115 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 SLC22A3O75751 556 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 OR2J2O76002 312 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 CD97P48960 835 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 SSR4P51571 173 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 GYS2P54840 703 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 TUBA3CQ13748 450 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 MLC1Q15049 377 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 DPY19L1Q2PZI1 675 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 FHL5Q5TD97 284 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 OR4F3Q6IEY1 312 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 TUBA3EQ6PEY2 450 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 PTRH1Q86Y79 214 aaKnown RBP17.79■□□□□ 0.44
HOXA9-202ENST00000396345 OR8J2Q8NGG1 315 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 OR5P2Q8WZ92 322 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 ELP4Q96EB1 424 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 MAGED4Q96JG8 741 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 RILPQ96NA2 401 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 ZNF317Q96PQ6 595 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-202ENST00000396345 UTP23Q9BRU9 249 aaKnown RBP17.79■□□□□ 0.44
HOXA9-202ENST00000396345 ANKRA2Q9H9E1 313 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 ZIM2Q9NZV7 527 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 PRODH2Q9UF12 536 aa17.79■□□□□ 0.44
HOXA9-202ENST00000396345 C19orf53Q9UNZ5 99 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-202ENST00000396345 SMG1Q96Q15 3661 aaKnown RBP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 OR5H15A6NDH6 313 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 EIF4E1BA6NMX2 242 aaKnown RBP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 IFI6P09912 130 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 IL12AP29459 219 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 CASRP41180 1078 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 KIR3DL1P43629 444 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 EMDP50402 254 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 CDK9P50750 372 aaKnown RBP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 STX1BP61266 288 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 KLRB1Q12918 225 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 NFATC3Q12968 1075 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 FAM174BQ3ZCQ3 159 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 NADK2Q4G0N4 442 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 PIGGQ5H8A4 983 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 SPANXN4Q5MJ08 99 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 CGB2Q6NT52 195 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 MIER2Q8N344 545 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 TMEM156Q8N614 296 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 GLB1L3Q8NCI6 653 aaPredicted RBP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 SDR39U1Q9NRG7 319 aaPredicted RBP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 DDX18Q9NVP1 670 aaKnown RBP17.78■□□□□ 0.44
HOXA9-202ENST00000396345 ANKRD10Q9NXR5 420 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 CSAG2Q9Y5P2 127 aa17.78■□□□□ 0.44
HOXA9-202ENST00000396345 UPK1AO00322 258 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 COQ9O75208 318 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 C6orf47O95873 294 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 GPX3P22352 226 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 S100A3P33764 101 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 TRHRP34981 398 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-202ENST00000396345 CD96P40200 585 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 CYB561P49447 251 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 HLCSP50747 726 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 WNT3P56703 355 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 OC90Q02509 493 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-202ENST00000396345 ZNF468Q5VIY5 522 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-202ENST00000396345 ANXA8L1Q5VT79 327 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 Q6ZS92 163 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 OR2L13Q8N349 312 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 ZNF441Q8N8Z8 693 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 CATSPER1Q8NEC5 780 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 VPS37AQ8NEZ2 397 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 SLC22A8Q8TCC7 542 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 ASB15Q8WXK1 588 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 ADIPOR1Q96A54 375 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 TP53INP1Q96A56 240 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 CHMP6Q96FZ7 201 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 RASL10BQ96S79 203 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 TMEM120AQ9BXJ8 343 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 ITPAQ9BY32 194 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 TAS2R9Q9NYW1 312 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 DTX4Q9Y2E6 619 aa17.77■□□□□ 0.44
HOXA9-202ENST00000396345 HEMK1Q9Y5R4 338 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-202ENST00000396345 KALRNO60229 2985 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 C9JVG2 144 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 RNASET2O00584 256 aaKnown RBP17.76■□□□□ 0.43
HOXA9-202ENST00000396345 CFLARO15519 480 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 PRB1P04280 392 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 MRPL19P49406 292 aaKnown RBP17.76■□□□□ 0.43
HOXA9-202ENST00000396345 TNFSF10P50591 281 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 NR0B1P51843 470 aaKnown RBP17.76■□□□□ 0.43
HOXA9-202ENST00000396345 DGKQP52824 942 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 ARFIP2P53365 341 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 DCAF7P61962 342 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 PHC1P78364 1004 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 IRX1P78414 480 aaPredicted RBP17.76■□□□□ 0.43
HOXA9-202ENST00000396345 SF3A3Q12874 501 aaKnown RBP eCLIP17.76■□□□□ 0.43
HOXA9-202ENST00000396345 TLR1Q15399 786 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 SLC6A19Q695T7 634 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 PAOXQ6QHF9 649 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 TAGAPQ8N103 731 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms