RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ALG1L2C9J202 215 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 LINC01565O15544 149 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 MBTPS2O43462 519 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TRIM3O75382 744 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 POP7O75817 140 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 C1QBP02746 253 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 RPLP0P05388 317 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC2A4P14672 509 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 FOSL1P15407 271 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TSPAN8P19075 237 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PRKACGP22612 351 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TALDO1P37837 337 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 ID4P47928 161 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PLIN5Q00G26 463 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 ZNF763Q0D2J5 394 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 DBPQ10586 325 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 HYAL2Q12891 473 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PPP1R8Q12972 351 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 BIKQ13323 160 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 MFSD13AQ14CX5 517 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TEAD4Q15561 434 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 CYP27C1Q4G0S4 372 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 RNLSQ5VYX0 342 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SAXO2Q658L1 398 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 LAMTOR1Q6IAA8 161 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 IL27RAQ6UWB1 636 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 FAM83HQ6ZRV2 1179 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 ZNF605Q86T29 641 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC9B2Q86UD5 537 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 KRT78Q8N1N4 520 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 LILRB1Q8NHL6 650 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 DEDD2Q8WXF8 326 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 RNF31Q96EP0 1072 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SIPA1Q96FS4 1042 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PITX2Q99697 317 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC30A2Q9BRI3 323 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 CRB3Q9BUF7 120 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 APOOQ9BUR5 198 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PHF7Q9BWX1 381 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 REEP4Q9H6H4 257 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC28A3Q9HAS3 691 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 IL21RQ9HBE5 538 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 C3orf14Q9HBI5 128 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 BCL2L10Q9HD36 194 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 LHX9Q9NQ69 397 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 DYRK4Q9NR20 520 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 ERVK13-1Q9NX77 482 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 GLTPQ9NZD2 209 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 NUFIP1Q9UHK0 495 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 VPS4AQ9UN37 437 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 V9GYH0 126 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TRANK1O15050 2925 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PCDH15Q96QU1 1955 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 ARPC4-TTLL3A0A0A6YYG9 625 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC35F4A4IF30 521 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TMEM202A6NGA9 273 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 GRXCR1A8MXD5 290 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 MYO1GB0I1T2 1018 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 GPR39O43194 453 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 WBP4O75554 376 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC16A8O95907 504 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PDGFAP04085 211 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 FCER2P06734 321 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PSKH1P11801 424 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 ICAM2P13598 275 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 CFL1P23528 166 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 GPR1P46091 355 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 RABIFP47224 123 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 RAB28P51157 221 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 DGKEP52429 567 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 EPHA4P54764 986 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TBPL1P62380 186 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PSPHP78330 225 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PRDX1Q06830 199 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 CYP4F3Q08477 520 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 RPS6KA2Q15349 733 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 MLF2Q15773 248 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 SMN1Q16637 294 aaKnown RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 SYT16Q17RD7 645 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 GFOD2Q3B7J2 385 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 KDM4DQ6B0I6 523 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 OGFOD3Q6PK18 319 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 C19orf48Q6RUI8 117 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 CD300LDQ6UXZ3 194 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 CBLL1Q75N03 491 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 TSPYL5Q86VY4 417 aaPredicted RBP5.07□□□□□ -1.6
VPS41-203ENST00000395969 CYP4Z1Q86W10 505 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SPNS2Q8IVW8 549 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PHC2Q8IXK0 858 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 YAF2Q8IY57 180 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 ZZZ3Q8IYH5 903 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 CDYL2Q8N8U2 506 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 FAM181AQ8N9Y4 354 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 OR10Z1Q8NGY1 313 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 OR6K2Q8NGY2 324 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 APH1BQ8WW43 257 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC22A18Q96BI1 424 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 EPYCQ99645 322 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 SLC17A9Q9BYT1 436 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms