RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 MRPS2Q9Y399 296 aaKnown RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 UGT2A1Q9Y4X1 527 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 ASB4Q9Y574 426 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 HEMK1Q9Y5R4 338 aaPredicted RBP6.55□□□□□ -1.36
RTN4-205ENST00000394609 FANCMQ8IYD8 2048 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 CABIN1Q9Y6J0 2220 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 WDFY4Q6ZS81 3184 aa6.55□□□□□ -1.36
RTN4-205ENST00000394609 SNRNP200O75643 2136 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 CCDC163A0A0D9SF12 145 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 A0A1W2PS29 197 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 ZNF860A6NHJ4 632 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 RHPN2P1A8MT19 583 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 FAM220BPB1ANY3 271 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PLOD2O00469 737 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CASC3O15234 703 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 PDPK1O15530 556 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 DEAF1O75398 565 aaPredicted RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 ERAL1O75616 437 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 CREG1O75629 220 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 AIFM1O95831 613 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 HPRP00739 348 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PROS1P07225 676 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 TFPTP0C1Z6 253 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 C8orf89P0DMQ9 161 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 TDGF1P13385 188 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 ETFAP13804 333 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 GPX2P18283 190 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 IL1RNP18510 177 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 TGM1P22735 817 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 AQP1P29972 269 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CHI3L1P36222 383 aaPredicted RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 SERPINB10P48595 397 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 OLR1P78380 273 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 BNC1Q01954 994 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 ABHD18Q0P651 414 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 KRR1Q13601 381 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 RGNQ15493 299 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 KCNJ8Q15842 424 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 C14orf28Q4W4Y0 310 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CYBRD1Q53TN4 286 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 MRM1Q6IN84 353 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 TUBA3EQ6PEY2 450 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 ENPP6Q6UWR7 440 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PRSS41Q7RTY9 318 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 SERPINA11Q86U17 422 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PTOV1Q86YD1 416 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 GATAD2AQ86YP4 633 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 EPHX4Q8IUS5 362 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CSNK1A1LQ8N752 337 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 AVL9Q8NBF6 648 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 SRFBP1Q8NEF9 429 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 GOT1L1Q8NHS2 421 aaPredicted RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 NT5CQ8TCD5 201 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PIGKQ92643 395 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 HDAC2Q92769 488 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 TXNDC15Q96J42 360 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 RNF145Q96MT1 663 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 TGM7Q96PF1 710 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 MAP3K3Q99759 626 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 MAPKAP1Q9BPZ7 522 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CCDC3Q9BQI4 270 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 FAIM2Q9BWQ8 316 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CHID1Q9BWS9 393 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 CXorf36Q9H7Y0 433 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 GORASP2Q9H8Y8 452 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 NECTIN3Q9NQS3 549 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PRMT8Q9NR22 394 aaPredicted RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 LRIT1Q9P2V4 623 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 ZNF282Q9UDV7 671 aaPredicted RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 UTS2RQ9UKP6 389 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 AP3M1Q9Y2T2 418 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 WBP11Q9Y2W2 641 aaKnown RBP6.54□□□□□ -1.36
RTN4-205ENST00000394609 NAALAD2Q9Y3Q0 740 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 PCDHGB1Q9Y5G3 927 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 RNF215Q9Y6U7 377 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 TECTAO75443 2155 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 LRP4O75096 1905 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 DMDP11532 3685 aa6.54□□□□□ -1.36
RTN4-205ENST00000394609 RNF103-CHMP3A0A140T963 221 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 SAGE2PA6NJ88 616 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 ACOX3O15254 700 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 PROM1O43490 865 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 MRPS14O60783 128 aaKnown RBP6.53□□□□□ -1.36
RTN4-205ENST00000394609 RGS9O75916 674 aaPredicted RBP6.53□□□□□ -1.36
RTN4-205ENST00000394609 PRKD3O94806 890 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 SCELO95171 688 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 SERPINA1P01009 418 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 ALPPL2P10696 532 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 DRD2P14416 443 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 GNSP15586 552 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 ZNF182P17025 639 aaPredicted RBP6.53□□□□□ -1.36
RTN4-205ENST00000394609 CKMT2P17540 419 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 ITIH1P19827 911 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 CD247P20963 164 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 CD40LGP29965 261 aa6.53□□□□□ -1.36
RTN4-205ENST00000394609 FEN1P39748 380 aaKnown RBP6.53□□□□□ -1.36
RTN4-205ENST00000394609 CTSKP43235 329 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms