RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 RBM39Q14498 530 aaKnown RBP11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 TGIF1Q15583 401 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 AMHR2Q16671 573 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 SYTL3Q4VX76 610 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 NCMAPQ5T1S8 102 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 SVBPQ8N300 66 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 OR52E4Q8NGH9 312 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 PPP3R2Q96LZ3 170 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 GGACTQ9BVM4 153 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 REEP4Q9H6H4 257 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 ZFP57Q9NU63 452 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 C2orf42Q9NWW7 574 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 TEX10Q9NXF1 929 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 J3KTA2 159 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 UBE2CO00762 179 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 DCLK1O15075 740 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 OR2T1O43869 369 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 RAD1O60671 282 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 KDELR2P33947 212 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 RNF212Q495C1 297 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 C18orf63Q68DL7 685 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 POMZP3Q6PJE2 187 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC29A4Q7RTT9 530 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 SLC9B2Q86UD5 537 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 S100PBPQ96BU1 408 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 LRR1Q96L50 414 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 ZFP3Q96NJ6 502 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 BBS4Q96RK4 519 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 ALX4Q9H161 411 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 OR10A4Q9H209 315 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 PIPOXQ9P0Z9 390 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
SLC28A1-203ENST00000394573 MYLKQ15746 1914 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 TSPAN3O60637 253 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 EIF4EP06730 217 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 AKR1C3P42330 323 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ITPK1Q13572 414 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 PAFAH1B3Q15102 231 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 CRB2Q5IJ48 1285 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 TMEM255AQ5JRV8 349 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ATG9BQ674R7 924 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 LAPTM4BQ86VI4 370 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 TMEM17Q86X19 198 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 CILP2Q8IUL8 1156 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 CAMKVQ8NCB2 501 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 RPLP0P6Q8NHW5 317 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 SLAMF9Q96A28 289 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 RBM18Q96H35 190 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ABHD1Q96SE0 405 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 SPATA5L1Q9BVQ7 753 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 LAMP5Q9UJQ1 280 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 PCTPQ9UKL6 214 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 WASF3Q9UPY6 502 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 DHRS7Q9Y394 339 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 UBIAD1Q9Y5Z9 338 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 TNRC6CQ9HCJ0 1690 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ADAMTS4O75173 837 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF44P15621 663 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 AKAP5P24588 427 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 SOX18P35713 384 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 CD79BP40259 229 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ETV5P41161 510 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 BLOC1S1P78537 153 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 MLLT11Q13015 90 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 CCDC157Q569K6 752 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 RHOUQ7L0Q8 258 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 TOMM5Q8N4H5 51 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 FAM46DQ8NEK8 389 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 MAL2Q969L2 176 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 ARMC5Q96C12 935 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 TCEAL4Q96EI5 215 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 OSMRQ99650 979 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 RIMS4Q9H426 269 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 DZANK1Q9NVP4 752 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 CNOT2Q9NZN8 540 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 RPS6KB2Q9UBS0 482 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
SLC28A1-203ENST00000394573 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CD8B2A6NJW9 211 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 M0QYT0 321 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 PPEF2O14830 753 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 PRAMEF2O60811 474 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 EBLN1P0CF75 366 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 CD8BP10966 210 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 TPI1P60174 286 aa11.87□□□□□ -0.51
SLC28A1-203ENST00000394573 TIAL1Q01085 375 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms