RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PCDHB11Q9Y5F2 797 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 DNMT3AQ9Y6K1 912 aaPredicted RBP17.87■□□□□ 0.45
HOXC6-202ENST00000394331 SIGLEC6O43699 453 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 APOL3O95236 402 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 EPB42P16452 691 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 SDC1P18827 310 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 RBBP4Q09028 425 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 LTB4RQ15722 352 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 C3P1Q6ZMU1 363 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 CDH26Q8IXH8 852 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 ACOT12Q8WYK0 555 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 ASIC4Q96FT7 647 aa17.87■□□□□ 0.45
HOXC6-202ENST00000394331 ZNF275Q9NSD4 429 aaPredicted RBP17.87■□□□□ 0.45
HOXC6-202ENST00000394331 TRDV1A0A1B0GX56 115 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 OR6C65A6NJZ3 312 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 LINC01387J3KSC0 135 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 PRKYO43930 277 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 CLDN7O95471 211 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 UGT2B7P16662 529 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 SPAM1P38567 509 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 GDF5P43026 501 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 HAAOP46952 286 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 C2orf80Q0P641 193 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 C12orf73Q69YU5 71 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 KRT74Q7RTS7 529 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 RFT1Q96AA3 541 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 SLC6A18Q96N87 628 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 G3V3Q6 166 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 NMBP08949 121 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 PRPS1L1P21108 318 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 LCN1P31025 176 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 HNF1BP35680 557 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 PTPN5P54829 565 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 OPCMLQ14982 345 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 WFDC5Q8TCV5 224 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 CMTM7Q96FZ5 175 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 HHIPL1Q96JK4 782 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 ABCG5Q9H222 651 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 LATS2Q9NRM7 1088 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 ACER3Q9NUN7 267 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 NUDT15Q9NV35 164 aa17.86■□□□□ 0.45
HOXC6-202ENST00000394331 ING1Q9UK53 422 aaPredicted RBP17.86■□□□□ 0.45
HOXC6-202ENST00000394331 RAB36O95755 333 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 C1QCP02747 245 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 INHAP05111 366 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 DCDC1P59894 354 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CRYZQ08257 329 aaKnown RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 GPR68Q15743 365 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CHRNA6Q15825 494 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CDKN3Q16667 212 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 OR52J3Q8NH60 311 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 ADAMTS14Q8WXS8 1223 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 SENP5Q96HI0 755 aaPredicted RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 PIP5K1AQ99755 562 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 HDHD2Q9H0R4 259 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 TEX13CA0A0J9YWL9 993 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 PRRG1O14668 218 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CASKO14936 926 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 GCM2O75603 506 aaPredicted RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 STK16O75716 305 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 SOD1P00441 154 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CBSLP0DN79 551 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CBSP35520 551 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 XCR1P46094 333 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 WNT3P56703 355 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 WNT4P56705 351 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 RPS25P62851 125 aaKnown RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 MADCAM1Q13477 382 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 SLC25A30Q5SVS4 291 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 SEZ6L2Q6UXD5 910 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 WASH2PQ6VEQ5 465 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 Q6ZNB5 142 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 APCDD1Q8J025 514 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 NXPE1Q8N323 547 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 OR8J2Q8NGG1 315 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 OR8J1Q8NGP2 316 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 TSSK3Q96PN8 268 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 TSSK6Q9BXA6 273 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 C1QTNF6Q9BXI9 259 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 KLHL42Q9P2K6 505 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 SPIN1Q9Y657 262 aaPredicted RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CEP350Q5VT06 3117 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 PIPSLA2A3N6 862 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 LOC730098B7Z3J9 87 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 GREM1O60565 184 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 SOD2P04179 222 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 S100A6P06703 90 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 C21orf58P58505 322 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 NTRK2Q16620 822 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CRTC2Q53ET0 693 aaPredicted RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CDKL4Q5MAI5 379 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 ZNF770Q6IQ21 691 aaPredicted RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 FAM198BQ6UWH4 519 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 AQP11Q8NBQ7 271 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 C11orf65Q8NCR3 313 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 TTC16Q8NEE8 873 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 VPS37AQ8NEZ2 397 aa17.85■□□□□ 0.45
HOXC6-202ENST00000394331 GTPBP3Q969Y2 492 aaKnown RBP17.85■□□□□ 0.45
HOXC6-202ENST00000394331 CHFRQ96EP1 664 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms