RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 KHKP50053 298 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 TGM3Q08188 693 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 DGCR6Q14129 220 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 COLEC12Q5KU26 742 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 SLC16A11Q8NCK7 471 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 OR6T1Q8NGN1 323 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 GIMAP5Q96F15 307 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 ZFYVE21Q9BQ24 234 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 GSDMCQ9BYG8 508 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 UBE2ZQ9H832 354 aaPredicted RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 ZNF556Q9HAH1 456 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 DAPP1Q9UN19 280 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 TPRKBQ9Y3C4 175 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 PDE9AO76083 593 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 ZIC2O95409 532 aaPredicted RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 WNT1P04628 370 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 SRFP11831 508 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 ELAVL4P26378 380 aaKnown RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 TSFMP43897 325 aaKnown RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 CCR5P51681 352 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 CRISP3P54108 245 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 MAZP56270 477 aaKnown RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 HOXC5Q00444 222 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 HHEXQ03014 270 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 PROX2Q3B8N5 592 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 TRMT12Q53H54 448 aaKnown RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 TMEM64Q6YI46 380 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 VRK2Q86Y07 508 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 TSTD1Q8NFU3 115 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 ZNF420Q8TAQ5 688 aaPredicted RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 BAHD1Q8TBE0 780 aaPredicted RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 SLC7A13Q8TCU3 470 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 KLHDC7BQ96G42 594 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 SLC35A4Q96G79 324 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 LYARQ9NX58 379 aaKnown RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 A4GNTQ9UNA3 340 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 GPR55Q9Y2T6 319 aaPredicted RBP14.16□□□□□ -0.14
GPC3-202ENST00000394299 LRP4O75096 1905 aa14.16□□□□□ -0.14
GPC3-202ENST00000394299 ZNF99A8MXY4 864 aaPredicted RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 C2orf74A8MZ97 194 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 OR10H3O60404 316 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 IGLV3-19P01714 112 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 CHMP24386 653 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 PPP2R1BP30154 601 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 MAN2A2P49641 1150 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 RPS6KA3P51812 740 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 VSX2P58304 361 aaPredicted RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 TNFRSF17Q02223 184 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 OCA2Q04671 838 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 BNIP3Q12983 259 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 AQP6Q13520 282 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 TDGQ13569 410 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 SUZ12Q15022 739 aaKnown RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 CEBPEQ15744 281 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 SYT13Q7L8C5 426 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 ALDH16A1Q8IZ83 802 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 RHOXF1Q8NHV9 184 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 TANKQ92844 425 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 FOXQ1Q9C009 403 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 GIMAP4Q9NUV9 329 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 POT1Q9NUX5 634 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 ZNF701M0R085 212 aaPredicted RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 LCKP06239 509 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 ST6GAL1P15907 406 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 ITIH1P19827 911 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 RNF144AP50876 292 aaPredicted RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 ARFIP1P53367 373 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 CXCR4P61073 352 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 LSM3P62310 102 aaKnown RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 SMAD4Q13485 552 aaKnown RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 UBXN2BQ14CS0 331 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 AP1ARQ63HQ0 302 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 SLC16A12Q6ZSM3 486 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 P3H2Q8IVL5 708 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 ZNF687Q8N1G0 1237 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 OR56A1Q8NGH5 318 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 ZDHHC1Q8WTX9 485 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 SERINC2Q96SA4 455 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 LRRC61Q9BV99 259 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 SLC38A1Q9H2H9 487 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 IL21RQ9HBE5 538 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 DNAAF2Q9NVR5 837 aaKnown RBP14.15□□□□□ -0.14
GPC3-202ENST00000394299 ZSCAN32Q9NX65 697 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 PSME2Q9UL46 239 aa14.15□□□□□ -0.14
GPC3-202ENST00000394299 IGHV1OR15-9A0A0B4J2B8 117 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 CLDN24A6NM45 220 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 RGS10O43665 173 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 B3GALT2O43825 422 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 H1F0P07305 194 aaKnown RBP14.14□□□□□ -0.15
GPC3-202ENST00000394299 ALOX12P18054 663 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 NUP107P57740 925 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 PRR5P85299 388 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 NFATC3Q12968 1075 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 FZD5Q13467 585 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 SPCS2Q15005 226 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 DCST1Q5T197 706 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 ABCA7Q8IZY2 2146 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 CAMKVQ8NCB2 501 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 OR4K14Q8NGD5 310 aa14.14□□□□□ -0.15
GPC3-202ENST00000394299 SFXN5Q8TD22 340 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms