RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ZCCHC3Q9NUD5 404 aaKnown RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 SLC27A6Q9Y2P4 619 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 YARS2Q9Y2Z4 477 aaKnown RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 HEATR5BQ9P2D3 2071 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 A0A0A6YYD5 115 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 LINC00854A0A1B0GVQ3 168 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 OR1F1O43749 312 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 TSPAN19P0C672 248 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 GPC1P35052 558 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 RPS5P46782 204 aaKnown RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 SLC9A3P48764 834 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 SMSP52788 366 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 SNAPC1Q16533 368 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 HNRNPA1L2Q32P51 320 aaKnown RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 PLK5Q496M5 336 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 FNDC3BQ53EP0 1204 aaKnown RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 PLPP4Q5VZY2 271 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 UTS2BQ765I0 119 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 LAPTM4BQ86VI4 370 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 ING5Q8WYH8 240 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 TM9SF4Q92544 642 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 DPH7Q9BTV6 452 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 MED18Q9BUE0 208 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 YIPF2Q9BWQ6 316 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 PLA2G12AQ9BZM1 189 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 PITHD1Q9GZP4 211 aaPredicted RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 SLC22A4Q9H015 551 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 FGF20Q9NP95 211 aaPredicted RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 DDX28Q9NUL7 540 aaKnown RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 SF3B6Q9Y3B4 125 aaKnown RBP17.77■□□□□ 0.44
CBX1-202ENST00000393408 IRAK3Q9Y616 596 aa17.77■□□□□ 0.44
CBX1-202ENST00000393408 A0A0G2JN53 185 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 HMX3A6NHT5 357 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 SEC14L5O43304 696 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 FKTNO75072 461 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 RPN2P04844 631 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 CHRM4P08173 479 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 CHRM5P08912 532 aaPredicted RBP17.77■□□□□ 0.43
CBX1-202ENST00000393408 CSF3P09919 207 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 TRAPPC2P0DI81 140 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 TRAPPC2BP0DI82 140 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 ACP2P11117 423 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 MYL12AP19105 171 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 ITGB8P26012 769 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 KHKP50053 298 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 RPS25P62851 125 aaKnown RBP17.77■□□□□ 0.43
CBX1-202ENST00000393408 TRA2BP62995 288 aaKnown RBP17.77■□□□□ 0.43
CBX1-202ENST00000393408 FUT5Q11128 374 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 ZFP69Q49AA0 526 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 OR2G6Q5TZ20 316 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 OR4C11Q6IEV9 310 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 HSDL2Q6YN16 418 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 HMGN2P46Q86SG4 172 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 OTUB1Q96FW1 271 aaPredicted RBP17.77■□□□□ 0.43
CBX1-202ENST00000393408 KCTD7Q96MP8 289 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 MMP28Q9H239 520 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 TM7SF3Q9NS93 570 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 DENND4AQ7Z401 1863 aa17.77■□□□□ 0.43
CBX1-202ENST00000393408 MUC22E2RYF6 1773 aaPredicted RBP17.76■□□□□ 0.43
CBX1-202ENST00000393408 EDDM13A0A1B0GTR0 161 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 TMEM129A0AVI4 362 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 FABP12A6NFH5 140 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 PPM1DO15297 605 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 LCMT2O60294 686 aaKnown RBP17.76■□□□□ 0.43
CBX1-202ENST00000393408 NR2F6P10588 404 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 SDC2P34741 201 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 MAN2A2P49641 1150 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 RAB40BQ12829 278 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 TPBGQ13641 420 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 DEFB115Q30KQ5 88 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 NDUFAF5Q5TEU4 345 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 FAM46CQ5VWP2 391 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 TMEM163Q8TC26 289 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 SPATA5L1Q9BVQ7 753 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 AICDAQ9GZX7 198 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 SNX7Q9UNH6 387 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 WASHC1A8K0Z3 465 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 A8MV72 311 aaPredicted RBP17.76■□□□□ 0.43
CBX1-202ENST00000393408 KIAA0355O15063 1070 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 HOXC11O43248 304 aaPredicted RBP17.76■□□□□ 0.43
CBX1-202ENST00000393408 PRODHO43272 600 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 DRD2P14416 443 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 GSTM3P21266 225 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 ARHGEF6Q15052 776 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 METRNLQ641Q3 311 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 WASH2PQ6VEQ5 465 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 MRGPREQ86SM8 312 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 GDPD1Q8N9F7 314 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 RNFT2Q96EX2 444 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 DIRAS2Q96HU8 199 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 TMEM245Q9H330 911 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 RERGLQ9H628 205 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 EGLN3Q9H6Z9 239 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 ISYNA1Q9NPH2 558 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 SLC35C2Q9NQQ7 365 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 CTPS2Q9NRF8 586 aa17.76■□□□□ 0.43
CBX1-202ENST00000393408 TFECO14948 347 aaPredicted RBP17.75■□□□□ 0.43
CBX1-202ENST00000393408 LRRTM2O43300 516 aa17.75■□□□□ 0.43
CBX1-202ENST00000393408 APOL3O95236 402 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms