RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 EML4Q9HC35 981 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SSU72Q9NP77 194 aaKnown RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 MYNNQ9NPC7 610 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SLC35C2Q9NQQ7 365 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 C1orf109Q9NX04 203 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SIRT5Q9NXA8 310 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 EHD3Q9NZN3 535 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 SEC14L3Q9UDX4 400 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ERRFI1Q9UJM3 462 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 ENTPD4Q9Y227 616 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 KLF13Q9Y2Y9 288 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 NBPF19A0A087WUL8 3843 aa7.08□□□□□ -1.28
HMGB3P1-201ENST00000393368 A1L4Q6 167 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 OR6C76A6NM76 312 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 TM9SF1O15321 606 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 CDC40O60508 579 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 PDE9AO76083 593 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZWINTO95229 277 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 FGF4P08620 206 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 FBXO45P0C2W1 286 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 NEFHP12036 1026 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 DRD2P14416 443 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 PRPH2P23942 346 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 MC3RP41968 323 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 SLC1A6P48664 564 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 NCBP2P52298 156 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ABCE1P61221 599 aaKnown RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 BST1Q10588 318 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 MAP4K2Q12851 820 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF791Q3KP31 576 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF385BQ569K4 471 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 XKR7Q5GH72 579 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 HHATQ5VTY9 493 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 HLA-DQA1Q5Y7H0 255 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 OPN5Q6U736 354 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 TMEM107Q6UX40 140 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 RTL4Q6ZR62 310 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 FAM47EQ6ZV65 393 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 WDR53Q7Z5U6 358 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 FAM98AQ8NCA5 519 aaKnown RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 OR2M7Q8NG81 312 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 OR7G2Q8NG99 324 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 OR7G1Q8NGA0 311 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 OR52N2Q8NGI0 321 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 DNAJB8Q8NHS0 232 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 SLC22A8Q8TCC7 542 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ADIPOR1Q96A54 375 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 TLCD1Q96CP7 247 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 SPACA9Q96E40 222 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 FCRL1Q96LA6 429 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 GPR137Q96N19 417 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 BBS4Q96RK4 519 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 SORT1Q99523 831 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 NXF5Q9H1B4 397 aaKnown RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 MIEF1Q9NQG6 463 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 GIMAP4Q9NUV9 329 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 PNPOQ9NVS9 261 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 TUBA8Q9NY65 449 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF639Q9UID6 485 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 PSME2Q9UL46 239 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 PCDHGB6Q9Y5F9 930 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 ACTL7BQ9Y614 415 aa7.07□□□□□ -1.28
HMGB3P1-201ENST00000393368 TRGV8A0A0C4DH27 118 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 MYO1GB0I1T2 1018 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 TMEM114B3SHH9 223 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 NPIPB8E9PQR5 432 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 KLRC4-KLRK1H3BQV0 150 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 TFECO14948 347 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 BIRC5O15392 142 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 LRRTM2O43300 516 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 CELA3AP09093 270 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 BCKDHAP12694 445 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 SERPINB5P36952 375 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 EMDP50402 254 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 CORO7P57737 925 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 PLGLB1Q02325 96 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF155Q12901 538 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 HSPB3Q12988 150 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 STX3Q13277 289 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 PTGR1Q14914 329 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 CMPK2Q5EBM0 449 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 NPSR1Q6W5P4 371 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 C3P1Q6ZMU1 363 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 RNF165Q6ZSG1 346 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 NCCRP1Q6ZVX7 275 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZNF551Q7Z340 670 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 FGD2Q7Z6J4 655 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 CROCCP2Q86T23 111 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 FJX1Q86VR8 437 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 CHERPQ8IWX8 916 aaKnown RBP7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 GPALPP1Q8IXQ4 340 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 FAM9CQ8IZT9 166 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 TAGAPQ8N103 731 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 LIX1Q8N485 282 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 KRTCAP2Q8N6L1 136 aa7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 ZFP62Q8NB50 900 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P1-201ENST00000393368 C7orf57Q8NEG2 295 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms