RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 LURAP1Q96LR2 239 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 OR51I1Q9H343 314 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 WDR45Q9Y484 360 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 TRBV2A0A0J9YWF9 115 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 TCRBV7S2A1N4TA0A589 114 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 TFPTP0C1Z6 253 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 CLEC4EQ9ULY5 219 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 APOA2P02652 100 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 PRKCAP17252 672 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 TRIM23P36406 574 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 F2RL1P55085 397 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 LILRA4P59901 499 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 SLBPQ14493 270 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 DDIT4LQ96D03 193 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 RSPRY1Q96DX4 576 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 LMO2P25791 158 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ARL2P36404 184 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 NPBWR1P48145 328 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 SNTB1Q13884 538 aaKnown RBP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ACTBL2Q562R1 376 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 GDPGP1Q6ZNW5 385 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 MAGIXQ9H6Y5 334 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 SERTAD4Q9NUC0 356 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 HAO2Q9NYQ3 351 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 EEF1E1O43324 174 aaKnown RBP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 LGR5O75473 907 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 MTPNP58546 118 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 PRR22Q8IZ63 422 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 OR8K3Q8NH51 312 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 BARD1Q99728 777 aaKnown RBP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 NUBP2Q9Y5Y2 271 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 SNRNP200O75643 2136 aaKnown RBP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ADH1BP00325 375 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 CSKP41240 450 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ATP4BP51164 291 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF763Q0D2J5 394 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 WDR45BQ5MNZ6 344 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ZDHHC14Q8IZN3 488 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 FOXRED1Q96CU9 486 aaPredicted RBP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 TSSK6Q9BXA6 273 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 QPCTLQ9NXS2 382 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 LRP5LA4QPB2 252 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 FAM221BA6H8Z2 402 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 OR5K4A6NMS3 321 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 GABARAPH6UMI1 98 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 GPR25O00155 361 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 GABARAPO95166 117 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 C8AP07357 584 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 HBQ1P09105 142 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 SMPD1P17405 629 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF8P17098 575 aaPredicted RBP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 PROZP22891 400 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 DUSP7Q16829 419 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 LYRM7Q5U5X0 104 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 CD163Q86VB7 1156 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 TMPRSS12Q86WS5 348 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 DCUN1D3Q8IWE4 304 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 FUBP3Q96I24 572 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC50-201ENST00000392455 NGBQ9NPG2 151 aa14.11□□□□□ -0.15
CCDC50-201ENST00000392455 USP2O75604 605 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CFIP05156 583 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A6P0DMU7 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A5P0DMU8 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A7P0DMV0 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A8P0DMV1 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A9P0DMV2 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 NFYAP23511 347 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 ARRB1P49407 418 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A2Q5DJT8 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A1Q5HYN5 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 COMMD7Q86VX2 200 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 THOC6Q86W42 341 aaKnown RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CT45A3Q8NHU0 189 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 TRMT10AQ8TBZ6 339 aaKnown RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 C12orf71A8MTZ7 269 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 PLSCR1O15162 318 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 CRYZL1O95825 349 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 RHCEP18577 417 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 RNF4P78317 190 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 TSTD1Q8NFU3 115 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 OR4K14Q8NGD5 310 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 OR8J3Q8NGG0 315 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 PLEKHO2Q8TD55 490 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 HMGB4Q8WW32 186 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 COQ10AQ96MF6 247 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 PCDHGA7Q9Y5G6 932 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 LOC102725191A0A1B0GVB3 256 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 ERI3O43414 337 aaKnown RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 MAGEB1P43366 347 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 HADHBP55084 474 aaKnown RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 NDUFAF5Q5TEU4 345 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF587Q96SQ5 575 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-201ENST00000392455 SDCBP2Q9H190 292 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 B4DGG1 531 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 GLB1P16278 677 aa14.1□□□□□ -0.15
CCDC50-201ENST00000392455 PKLRP30613 574 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms