RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 CACNA1IQ9P0X4 2223 aa11.43□□□□□ -0.58
CAPRIN1-202ENST00000389645 SEC16AO15027 2179 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 FOXE1O00358 373 aaPredicted RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 LCMT2O60294 686 aaKnown RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 SCO1O75880 301 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 DDCP20711 480 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 TGM4P49221 684 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 PPP5CP53041 499 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 SLC16A1P53985 500 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 OLR1P78380 273 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ZNF33BQ06732 778 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 NDUFAF5Q5TEU4 345 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 PAQR6Q6TCH4 344 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 CYP4Z2PQ8N1L4 340 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ZNF614Q8N883 585 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ZFP41Q8N8Y5 198 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 FLCNQ8NFG4 579 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 RGMAQ96B86 450 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 OMA1Q96E52 524 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ART5Q96L15 291 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 QRFPRQ96P65 431 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ENTPD4Q9Y227 616 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 KIAA1549LQ6ZVL6 1849 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 WDR87Q6ZQQ6 2873 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 C2CD4DB7Z1M9 353 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 EIF2S1P05198 315 aaKnown RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 IFI30P13284 250 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 TFF2Q03403 129 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 DPTQ07507 201 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 MAP4K2Q12851 820 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 PUM1Q14671 1186 aaKnown RBP eCLIP11.42□□□□□ -0.583e-9■□□□□ 10.1
CAPRIN1-202ENST00000389645 OXA1LQ15070 435 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 USP30Q70CQ3 517 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 SPATC1Q76KD6 591 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 FAM46DQ8NEK8 389 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ZCCHC10Q8TBK6 192 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 TM4SF18Q96CE8 201 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ITPKCQ96DU7 683 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 C1GALT1C1Q96EU7 318 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 TREX2Q9BQ50 279 aaPredicted RBP11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 ABCB9Q9NP78 766 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 SLC9A8Q9Y2E8 581 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 NAALAD2Q9Y3Q0 740 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 PCDHGB1Q9Y5G3 927 aa11.42□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3DA0A087WVF3 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3IA0A087WXS9 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3EA0A087X179 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3KA0A087X1G2 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3FA6NER0 549 aaPredicted RBP11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3LB9A6J9 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 SNX4O95219 450 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3HP0C7X1 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 NTSR1P30989 418 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TGFBR2P37173 567 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 XCR1P46094 333 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TAS2R41P59536 307 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 CDK3Q00526 305 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 ATAD3BQ5T9A4 648 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3GQ6DHY5 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3CQ6IPX1 549 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TMEM107Q6UX40 140 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 PDZD3Q86UT5 571 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 ADGRF3Q8IZF5 1079 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 TBC1D3Q8IZP1 549 aaPredicted RBP11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 DENND6BQ8NEG7 585 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 OR5P2Q8WZ92 322 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 SLC9A6Q92581 669 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 KAT2AQ92830 837 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 CXorf40BQ96DE9 158 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 PITX2Q99697 317 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 WFDC6Q9BQY6 131 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 MMP27Q9H306 513 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 PDE9AO76083 593 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 HOXB2P14652 356 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 PSMA1P25786 263 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 PIK3CBP42338 1070 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 DEFA1P59665 94 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 DEFA3P59666 94 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 SEC23BQ15437 767 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 GPR19Q15760 415 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 ARMC4Q5T2S8 1044 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 STEAP3Q658P3 488 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 DGLUCYQ7Z3D6 616 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 LAS2Q8IYD9 372 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 ARSGQ96EG1 525 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 C11orf24Q96F05 449 aaPredicted RBP11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 FCRL1Q96LA6 429 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 FCRL4Q96PJ5 515 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 MAPKAP1Q9BPZ7 522 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 GABARAPL3Q9BY60 117 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 MROQ9BYG7 248 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 CA5BQ9Y2D0 317 aa11.41□□□□□ -0.58
CAPRIN1-202ENST00000389645 A0A1W2PQF6 199 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms