RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 M0R3H8 397 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 APOL3O95236 402 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 MAGEA12P43365 314 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 SLC5A12Q1EHB4 618 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 AGBL4Q5VU57 503 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 SPATC1Q76KD6 591 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 P4HA3Q7Z4N8 544 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 UBASH3BQ8TF42 649 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 KAT8Q9H7Z6 458 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 MTHFD2LQ9H903 347 aaPredicted RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 MAN2B2Q9Y2E5 1009 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 PTRH2Q9Y3E5 179 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 TET1Q8NFU7 2136 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 VILLO15195 856 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 DLX2Q07687 328 aaPredicted RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 CRYZQ08257 329 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 TIGD6Q17RP2 521 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 TMEM225Q6GV28 225 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 RETREG3Q86VR2 466 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 ENDOVQ8N8Q3 282 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 C19orf47Q8N9M1 422 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 POC5Q8NA72 575 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 ALG14Q96F25 216 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 CLMPQ9H6B4 373 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 FGF21Q9NSA1 209 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 ARNTLO00327 626 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 RNF13O43567 381 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 ASNA1O43681 348 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 SRPX2O60687 465 aaPredicted RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 RHCEP18577 417 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 SLC6A6P31641 620 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 TFF2Q03403 129 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 FAM83HQ6ZRV2 1179 aaPredicted RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 NEK7Q8TDX7 302 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 TEX10Q9NXF1 929 aaPredicted RBP12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 SERGEFQ9UGK8 458 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 PCDHGB7Q9Y5F8 929 aa12.4□□□□□ -0.42
PTPRN2-202ENST00000389416 ZNF99A8MXY4 864 aaPredicted RBP12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 FOXE1O00358 373 aaPredicted RBP12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 XPNPEP2O43895 674 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 DBIP07108 87 aaKnown RBP12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 DNASE1L1P49184 302 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 KIAA1024LP59773 190 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 PIN1Q13526 163 aaPredicted RBP12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 GGTA1PQ4G0N0 100 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 UBQLNLQ8IYU4 475 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 FRS2Q8WU20 508 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 TMCO6Q96DC7 493 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 TTTY10Q9BZA0 68 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 CUTCQ9NTM9 273 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 PAIP2BQ9ULR5 123 aaKnown RBP12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 ASB1Q9Y576 335 aa12.4□□□□□ -0.43
PTPRN2-202ENST00000389416 C2orf92A0A1B0GVN3 265 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 SNX4O95219 450 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 AIFM1O95831 613 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 FESP07332 822 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 CD36P16671 472 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 CSNK1G2P78368 415 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 RNASE12Q5GAN4 147 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 PRSS36Q5K4E3 855 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 CCNJQ5T5M9 372 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 ARL9Q6T311 187 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 MAVSQ7Z434 540 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 CHERPQ8IWX8 916 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 ZNF676Q8N7Q3 588 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 MFSD2AQ8NA29 543 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 SLC22A8Q8TCC7 542 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 OSTF1Q92882 214 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 KIR3DX1Q9H7L2 352 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 LTB4R2Q9NPC1 389 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 GRHPRQ9UBQ7 328 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 A0A0G2JPF8 293 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 IQCMA0A1B0GVH7 501 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 HNRNPCL3B7ZW38 293 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 SOX30O94993 753 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 GPR75O95800 540 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 RPLP0P05388 317 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 HNRNPCL4P0DMR1 293 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 GABRG2P18507 467 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 SPEM1Q8N4L4 309 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 AGBL5Q8NDL9 886 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 UBTD2Q8WUN7 234 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 RSC1A1Q92681 617 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 UFD1Q92890 307 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 TCTN2Q96GX1 697 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 ARHGAP9Q9BRR9 750 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 POLDIP3Q9BY77 421 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 CNOT1A5YKK6 2376 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 H3BSH0 61 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 TOR1BO14657 336 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 CD2P06729 351 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 ADORA3P0DMS8 318 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 GPR4P46093 362 aa12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 MCCD1P59942 119 aaPredicted RBP12.39□□□□□ -0.43
PTPRN2-202ENST00000389416 RHAGQ02094 409 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms