RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 EPN2O95208 641 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 NADKO95544 446 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 ETHE1O95571 254 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 IGLV2-14P01704 120 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GBAP04062 536 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SEMG1P04279 462 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 C8GP07360 202 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 ABCB1P08183 1280 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 CCDC159P0C7I6 412 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 MPC1LP0DKB6 136 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 JUPP14923 745 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 ZNF12P17014 697 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 IL1RNP18510 177 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TNFRSF1BP20333 461 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 CYP2A7P20853 494 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 PRPS1L1P21108 318 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 PRPH2P23942 346 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 HOXD10P28358 340 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 PBLDP30039 288 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 HLA-FP30511 346 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 HOXA9P31269 272 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 MAGEA2P43356 314 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 BDKRB1P46663 353 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 PPP3CCP48454 512 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TRPC1P48995 793 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 BCAP31P51572 246 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 ARHGDIAP52565 204 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 NCS1P62166 190 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 RPP38P78345 283 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 RAE1P78406 368 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 IFITM3Q01628 133 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 IRF8Q02556 426 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 RELAQ04206 551 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 IL18R1Q13478 541 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 NAE1Q13564 534 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 DOC2AQ14183 400 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 HABP2Q14520 560 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 ZNF846Q147U1 533 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 RGS21Q2M5E4 152 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 HKDC1Q2TB90 917 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 RFX4Q33E94 735 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 POM121L1PQ3SYA9 428 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GGTA1PQ4G0N0 100 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 PAGE2BQ5JRK9 111 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 KDM4DQ6B0I6 523 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 METTL2BQ6P1Q9 378 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 C22orf39Q6P5X5 142 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GDPD4Q6W3E5 623 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 EIF3MQ7L2H7 374 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 HSD11B1LQ7Z5J1 315 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GRASPQ7Z6J2 395 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 ADCK1Q86TW2 530 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SERPINA11Q86U17 422 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 THOC6Q86W42 341 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 TMEM25Q86YD3 366 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 FAM90A1Q86YD7 464 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 CCDC71Q8IV32 467 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 FAM217AQ8IXS0 508 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SLC39A11Q8N1S5 342 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TCAIMQ8N3R3 496 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SETD9Q8NE22 299 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 FIBINQ8TAL6 211 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 NTN5Q8WTR8 489 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 CHPT1Q8WUD6 406 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 MRPS31Q92665 395 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 RPL3LQ92901 407 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 ZNF566Q969W8 418 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TESCQ96BS2 214 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 PPP1R14BQ96C90 147 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 YIPF6Q96EC8 236 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 ZNF641Q96N77 438 aaPredicted RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 C1orf43Q9BWL3 253 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 GABARAPL1Q9H0R8 117 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SGK2Q9HBY8 427 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TCF7L1Q9HCS4 588 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 IL1RAPQ9NPH3 570 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 KRT84Q9NSB2 600 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TRNAU1APQ9NX07 287 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 SCN3BQ9NY72 215 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 VPS29Q9UBQ0 182 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 DAPK2Q9UIK4 370 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 RPS6KA6Q9UK32 745 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 ZDHHC8Q9ULC8 765 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 FZD4Q9ULV1 537 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 CCL26Q9Y258 94 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 ERGIC3Q9Y282 383 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SH3GLB1Q9Y371 365 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 TPRKBQ9Y3C4 175 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 NAALAD2Q9Y3Q0 740 aa3.53□□□□□ -1.84
SMC6-202ENST00000381272 SAMHD1Q9Y3Z3 626 aaKnown RBP3.53□□□□□ -1.84
SMC6-202ENST00000381272 PLXND1Q9Y4D7 1925 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 IGLV3-16A0A075B6K0 115 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 TMEM247A6NEH6 219 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 PRSS29PA6NIE9 313 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 ARHGEF33A8MVX0 844 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 CLDN25C9JDP6 229 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 NEDD8-MDP1E9PL57 170 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 F5H697 171 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 M0QX08 132 aa3.52□□□□□ -1.85
SMC6-202ENST00000381272 SAP18O00422 153 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms