RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 OR7G1Q8NGA0 311 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 OR52R1Q8NGF1 315 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 OR4A15Q8NGL6 344 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 THAP3Q8WTV1 239 aaPredicted RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 ERP27Q96DN0 273 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 SPDL1Q96EA4 605 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 INPP5KQ9BT40 448 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 MYLK2Q9H1R3 596 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 MRGBPQ9NV56 204 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 TAS2R9Q9NYW1 312 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 PTGFRNQ9P2B2 879 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 BCAP29Q9UHQ4 241 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 BTNL2Q9UIR0 455 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 C19orf53Q9UNZ5 99 aaPredicted RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 DTX4Q9Y2E6 619 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 SNX8Q9Y5X2 465 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 NUP214P35658 2090 aaPredicted RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 DOCK10Q96BY6 2186 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 IGSF10Q6WRI0 2623 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 MAN1A2O60476 641 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CEACAM4O75871 244 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CPSF4O95639 269 aaKnown RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 CDKN2CP42773 168 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 AP2B1P63010 937 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 RNF4P78317 190 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 TLR1Q15399 786 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 MAPKAPK3Q16644 382 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 FCRLBQ6BAA4 426 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 H3F3CQ6NXT2 135 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 JMJD6Q6NYC1 403 aaPredicted RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 SLC2A7Q6PXP3 512 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CLEC4FQ8N1N0 589 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 ANKS4BQ8N8V4 417 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 FDCSPQ8NFU4 85 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 GOT1L1Q8NHS2 421 aaPredicted RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 C16orf52Q8NHV5 167 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 FAM120BQ96EK7 910 aaKnown RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 NPAS2Q99743 824 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 CCDC106Q9BWC9 280 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 DEFB126Q9BYW3 111 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 LIN28AQ9H9Z2 209 aaKnown RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 NEUROD4Q9HD90 331 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 DDX18Q9NVP1 670 aaKnown RBP11.76□□□□□ -0.53
SMN1-202ENST00000380707 GPR83Q9NYM4 423 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 NTMQ9P121 344 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 PCDHGB4Q9UN71 923 aa11.76□□□□□ -0.53
SMN1-202ENST00000380707 KMT2BQ9UMN6 2715 aaPredicted RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 A0A1W2PP18 115 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 NDUFAB1O14561 156 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 PRAMEF2O60811 474 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 BCAS2O75934 225 aaPredicted RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 ZFAND5O76080 213 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 PSMG1O95456 288 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 SNRPB2P08579 225 aaKnown RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 IFI6P09912 130 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 ADSLP30566 484 aaPredicted RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 CCT3P49368 545 aaKnown RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 POLE2P56282 527 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 MYBPC3Q14896 1274 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 EBPQ15125 230 aaKnown RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 LINC00303Q3SY05 128 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 B3GNTL1Q67FW5 361 aaPredicted RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 TCTN3Q6NUS6 607 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 C16orf47Q6ZP98 133 aaPredicted RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 MSANTD1Q6ZTZ1 278 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 TREML1Q86YW5 311 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 CCDC197Q8NCU1 140 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 OR8K3Q8NH51 312 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 OR5AK3PQ8NH89 298 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 GTF2H4Q92759 462 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 PANX1Q96RD7 426 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 WWTR1Q9GZV5 400 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 ZNF552Q9H707 407 aaPredicted RBP11.75□□□□□ -0.53
SMN1-202ENST00000380707 SLC6A13Q9NSD5 602 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMN1-202ENST00000380707 CAPN7Q9Y6W3 813 aa11.75□□□□□ -0.53
SMN1-202ENST00000380707 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 LOC100653049A0A140TA62 436 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 DYTNA2CJ06 578 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 OR6C76A6NM76 312 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 RFXANKO14593 260 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 SLC22A2O15244 555 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 EMC8O43402 210 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 KRT34O76011 436 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 C1QCP02747 245 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 GSNP06396 782 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 PTPN6P29350 595 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 SOX11P35716 441 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 PRKAG1P54619 331 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 LRRC74AQ0VAA2 488 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 GAB1Q13480 694 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 AGAP7PQ5VUJ5 663 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 IRAK1BP1Q5VVH5 260 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 TMEM64Q6YI46 380 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 SLC29A4Q7RTT9 530 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 SZRD1Q7Z422 152 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
SMN1-202ENST00000380707 RPS19BP1Q86WX3 136 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms