RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 HCRTR2O43614 444 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 AIFM1O95831 613 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 MLLT10P55197 1068 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 BNIP3Q12983 259 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 LCN1P1Q5VSP4 162 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 MFSD9Q8NBP5 474 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 OR9Q2Q8NGE9 314 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 LRIT1Q9P2V4 623 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 ABCD2Q9UBJ2 740 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 A0A1W2PPW3 197 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 C5orf67F2Z3F1 127 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 TNFRSF10CO14798 259 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 WDR53Q7Z5U6 358 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 ADAMTS18Q8TE60 1221 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 SLC6A18Q96N87 628 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 OR52A5Q9H2C5 316 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 NFKBIL1Q9UBC1 381 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-202ENST00000377797 RARRES3Q9UL19 164 aa13.72□□□□□ -0.21
TCOF1-202ENST00000377797 CLDN25C9JDP6 229 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 FRS3O43559 492 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 CPNE3O75131 537 aaKnown RBP13.71□□□□□ -0.21
TCOF1-202ENST00000377797 DBIP07108 87 aaKnown RBP13.71□□□□□ -0.21
TCOF1-202ENST00000377797 SLC9A3P48764 834 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 MADCAM1Q13477 382 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 SYCE2Q6PIF2 218 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 NLRP8Q86W28 1048 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 KLHDC8BQ8IXV7 354 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 VWA5B2Q8N398 1253 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 GALNT15Q8N3T1 639 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 SLC44A3Q8N4M1 653 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 MR1Q95460 341 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 EPYCQ99645 322 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 SNTG1Q9NSN8 517 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 GALNT8Q9NY28 637 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 ASIC5Q9NY37 505 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 OTOFQ9HC10 1997 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 NUP214P35658 2090 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-202ENST00000377797 KIAA1024LP59773 190 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 SYPL1Q16563 259 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 OR9A4Q8NGU2 314 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 TANKQ92844 425 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 RACGAP1Q9H0H5 632 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 ABCB9Q9NP78 766 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 ERVK-18Q9QC07 812 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 IGLV3-16A0A075B6K0 115 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 MOSPD3O75425 235 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 SNX4O95219 450 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 PKLRP30613 574 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 TXNL4AP83876 142 aaKnown RBP13.71□□□□□ -0.21
TCOF1-202ENST00000377797 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 ADNP2Q6IQ32 1131 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 DLEU7Q6UYE1 221 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-202ENST00000377797 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 HORMAD2Q8N7B1 307 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 OR8J1Q8NGP2 316 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 KIR3DX1Q9H7L2 352 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 HS3ST3A1Q9Y663 406 aa13.71□□□□□ -0.21
TCOF1-202ENST00000377797 PLPP1O14494 284 aa13.71□□□□□ -0.22
TCOF1-202ENST00000377797 BCAT2O15382 392 aaPredicted RBP13.71□□□□□ -0.22
TCOF1-202ENST00000377797 AQP9O43315 295 aa13.71□□□□□ -0.22
TCOF1-202ENST00000377797 GIMD1P0DJR0 217 aa13.71□□□□□ -0.22
TCOF1-202ENST00000377797 GP1BBP13224 206 aa13.71□□□□□ -0.22
TCOF1-202ENST00000377797 TSTQ16762 297 aaKnown RBP13.71□□□□□ -0.22
TCOF1-202ENST00000377797 KLHL36Q8N4N3 616 aa13.71□□□□□ -0.22
TCOF1-202ENST00000377797 PPT2Q9UMR5 302 aa13.71□□□□□ -0.22
TCOF1-202ENST00000377797 C2CD4DB7Z1M9 353 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 OXSR1O95747 527 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-202ENST00000377797 ADAP00813 363 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 MT-ND2P03891 347 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 GNAO1P09471 354 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 CBLP22681 906 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 SLC19A1P41440 591 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 EIF2B2P49770 351 aaKnown RBP13.7□□□□□ -0.22
TCOF1-202ENST00000377797 ADAM15Q13444 863 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 FAM131AQ6UXB0 335 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 OR6C4Q8NGE1 309 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 SLC37A2Q8TED4 501 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 ZFP90Q8TF47 636 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 GATA6Q92908 595 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 TRIM2Q9C040 744 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 DCSTAMPQ9H295 470 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 MED16Q9Y2X0 877 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 SIT1Q9Y3P8 196 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 SLC1A7O00341 560 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 RENP00797 406 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 PABPC4LP0CB38 370 aaKnown RBP13.7□□□□□ -0.22
TCOF1-202ENST00000377797 ARAFP10398 606 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 METTL25Q8N6Q8 603 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 DIRAS2Q96HU8 199 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 PRRG4Q9BZD6 226 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 FTSJ1Q9UET6 329 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 SERGEFQ9UGK8 458 aa13.7□□□□□ -0.22
TCOF1-202ENST00000377797 APOL3O95236 402 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms