RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 OR4K14Q8NGD5 310 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 FOXC2Q99958 501 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 BRINP2Q9C0B6 783 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 ACKR4Q9NPB9 350 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 PFDN4Q9NQP4 134 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 PSMC3IPQ9P2W1 217 aaPredicted RBP17.58■□□□□ 0.41
CBWD3-204ENST00000377349 PCDHGB3Q9Y5G1 929 aa17.58■□□□□ 0.41
CBWD3-204ENST00000377349 C2orf92A0A1B0GVN3 265 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 SMIM23A6NLE4 172 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 SBK3P0C264 359 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 GABRA1P14867 456 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 HMOX2P30519 316 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 SLC37A1P57057 533 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 SLC29A2Q14542 456 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 EBPQ15125 230 aaKnown RBP17.57■□□□□ 0.4
CBWD3-204ENST00000377349 POMZP3Q6PJE2 187 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 WDR53Q7Z5U6 358 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-204ENST00000377349 METTL4Q8N3J2 472 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 ZNF441Q8N8Z8 693 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 MYRIPQ8NFW9 859 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 NEIL3Q8TAT5 605 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 NINJ1Q92982 152 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 TMEM237Q96Q45 408 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 SH3GL2Q99962 352 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 CCM2LQ9NUG4 571 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-204ENST00000377349 ALKBH4Q9NXW9 302 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 PSD3Q9NYI0 1048 aa17.57■□□□□ 0.4
CBWD3-204ENST00000377349 BOKQ9UMX3 212 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-204ENST00000377349 PYGBP11216 843 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 HSD17B3P37058 310 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 FEN1P39748 380 aaKnown RBP17.56■□□□□ 0.4
CBWD3-204ENST00000377349 NNATQ16517 81 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 NTRK2Q16620 822 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 C10orf62Q5T681 223 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-204ENST00000377349 FAM180BQ6P0A1 224 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 PRR22Q8IZ63 422 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 TAGAPQ8N103 731 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 C1orf52Q8N6N3 182 aaKnown RBP17.56■□□□□ 0.4
CBWD3-204ENST00000377349 LRRN4CLQ8ND94 238 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 KLHL29Q96CT2 875 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 GPATCH1Q9BRR8 931 aaKnown RBP17.56■□□□□ 0.4
CBWD3-204ENST00000377349 NMRK1Q9NWW6 199 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 QPCTLQ9NXS2 382 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 CRIM1Q9NZV1 1036 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 CNIH4Q9P003 139 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 TRPS1Q9UHF7 1281 aa17.56■□□□□ 0.4
CBWD3-204ENST00000377349 NSD1Q96L73 2696 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-204ENST00000377349 OR6C76A6NM76 312 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 SYT5O00445 386 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 DLX3O60479 287 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 GUCY1B2O75343 617 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TRIM3O75382 744 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CT62P0C5K7 136 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 SERPINB3P29508 390 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 WNT3P56703 355 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TBL3Q12788 808 aaKnown RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 UNC50Q53HI1 259 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ZNF678Q5SXM1 525 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 GPRIN3Q6ZVF9 776 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 DND1Q8IYX4 353 aaKnown RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CCNYL1Q8N7R7 359 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 UBLCP1Q8WVY7 318 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 DIO2Q92813 273 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 POLDIP3Q9BY77 421 aaKnown RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CXorf21Q9HAI6 301 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 RASSF1Q9NS23 344 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 B4GALT7Q9UBV7 327 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 BCAP29Q9UHQ4 241 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ST6GALNAC2Q9UJ37 374 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ADAM29Q9UKF5 820 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 GOLGA6L10A6NI86 522 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 MANBAO00462 879 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 KRT6AP02538 564 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 KRT6BP04259 564 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CD99P14209 185 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CPMP14384 443 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 PORP16435 677 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ATP5F1P24539 256 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CEACAM8P31997 349 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 SLCO1A2P46721 670 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 KRT6CP48668 564 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TRPC1P48995 793 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 FBXW4P57775 412 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CRYZQ08257 329 aaKnown RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 GALNT1Q10472 559 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 RASA2Q15283 850 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ACSF3Q4G176 576 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-204ENST00000377349 FNDC7Q5VTL7 733 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TIFABQ6ZNK6 161 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TGIF2LYQ8IUE0 185 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TMEM151AQ8N4L1 468 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 TNIP2Q8NFZ5 429 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 CDC26Q8NHZ8 85 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 METTL6Q8TCB7 284 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 DOHHQ9BU89 302 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 OR10A5Q9H207 317 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ZNF225Q9UK10 706 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 PCDHA9Q9Y5H5 950 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 ARID1AO14497 2285 aa17.55■□□□□ 0.4
CBWD3-204ENST00000377349 GNG14A0A1W2PPG7 69 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms