RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CDK3Q00526 305 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 BAK1Q16611 211 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 ATAT1Q5SQI0 421 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF544Q6NX49 715 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 LINC00471Q8N535 108 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 Q8N9G6 341 aaPredicted RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 TP53I13Q8NBR0 393 aaPredicted RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 BBS10Q8TAM1 723 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 BADQ92934 168 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 SLC25A46Q96AG3 418 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 NEDD4LQ96PU5 975 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 NELL2Q99435 816 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 YIPF4Q9BSR8 244 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 SLC35C2Q9NQQ7 365 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 CTPS2Q9NRF8 586 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 DEC1Q9P2X7 70 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 PCDHGB2Q9Y5G2 931 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 SLC35F4A4IF30 521 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 SLC35G4P0C7Q5 338 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 DRD2P14416 443 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 RCVRNP35243 200 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 HTR3AP46098 478 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 COPZ1P61923 177 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF362Q5T0B9 420 aaPredicted RBP23.86■■□□□ 1.41
C9orf40-201ENST00000376854 SLC7A5P1Q8MH63 180 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 GALNT6Q8NCL4 622 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 MORN4Q8NDC4 146 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 TMEM203Q969S6 136 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 SPATA5L1Q9BVQ7 753 aa23.86■■□□□ 1.41
C9orf40-201ENST00000376854 GLOD5A6NK44 160 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 PRKRAO75569 313 aaKnown RBP23.85■■□□□ 1.41
C9orf40-201ENST00000376854 CHRM4P08173 479 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 CPEP16870 476 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 PTGER1P34995 402 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 BUD31P41223 144 aaPredicted RBP23.85■■□□□ 1.41
C9orf40-201ENST00000376854 CDK5Q00535 292 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 GPR19Q15760 415 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 SNAPC1Q16533 368 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 UAP1L1Q3KQV9 507 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 NXNL2Q5VZ03 156 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 C1orf94Q6P1W5 598 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 PRRC1Q96M27 445 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 SRRQ9GZT4 340 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 FBXW2Q9UKT8 454 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 GRIP1Q9Y3R0 1128 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 LGI1O95970 557 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 RFX2P48378 723 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 GAB4Q2WGN9 574 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 KIAA1211LQ6NV74 962 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF793Q6ZN11 406 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 CREB3L4Q8TEY5 395 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 BBS4Q96RK4 519 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 RERGLQ9H628 205 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 CARD8Q9Y2G2 431 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 UNC80Q8N2C7 3258 aa23.85■■□□□ 1.41
C9orf40-201ENST00000376854 IL1AP01583 271 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 IL7P13232 177 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 MYL12AP19105 171 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 NTSP30990 170 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 SMSP52788 366 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 EFNB1P98172 346 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 IFITM2Q01629 132 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 GPR50Q13585 617 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 FLYWCH1Q4VC44 716 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 C22orf42Q6IC83 251 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 AICDAQ9GZX7 198 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 TMEM245Q9H330 911 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 BCL2L10Q9HD36 194 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 TIGARQ9NQ88 270 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF221Q9UK13 617 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 SPIN1Q9Y657 262 aaPredicted RBP23.84■■□□□ 1.41
C9orf40-201ENST00000376854 COL4A3Q01955 1670 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 LRIT2A6NDA9 550 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 CLEC3AO75596 197 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 STATHP02808 62 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 CHRM5P08912 532 aaPredicted RBP23.84■■□□□ 1.41
C9orf40-201ENST00000376854 ACADMP11310 421 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 FUT5Q11128 374 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 HNRNPA0Q13151 305 aaKnown RBP23.84■■□□□ 1.41
C9orf40-201ENST00000376854 KLHL22Q53GT1 634 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 ENTPD8Q5MY95 495 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF517Q6ZMY9 492 aaPredicted RBP23.84■■□□□ 1.41
C9orf40-201ENST00000376854 OR6F1Q8NGZ6 308 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 FGF11Q92914 225 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 FERD3LQ96RJ6 166 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 FAIM2Q9BWQ8 316 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 PLA2G12AQ9BZM1 189 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 ABCB9Q9NP78 766 aa23.84■■□□□ 1.41
C9orf40-201ENST00000376854 IGLON5A6NGN9 336 aa23.83■■□□□ 1.41
C9orf40-201ENST00000376854 ERAL1O75616 437 aaKnown RBP23.83■■□□□ 1.41
C9orf40-201ENST00000376854 TSPAN19P0C672 248 aa23.83■■□□□ 1.41
C9orf40-201ENST00000376854 LASP1Q14847 261 aaKnown RBP23.83■■□□□ 1.41
C9orf40-201ENST00000376854 C3orf38Q5JPI3 329 aa23.83■■□□□ 1.41
C9orf40-201ENST00000376854 EGLN3Q9H6Z9 239 aa23.83■■□□□ 1.41
C9orf40-201ENST00000376854 IGKV1-8A0A0C4DH67 115 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 C1QTNF3-AMACRE9PGA6 284 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 MAN2B1O00754 1011 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 APOL3O95236 402 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 CLEC2LP0C7M8 214 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 MSL3P1P0C860 447 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms