RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 IGKV3D-11A0A0A0MRZ8 115 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 A0A1W2PR48 441 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 OR14I1A6ND48 311 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 LSM1O15116 133 aaKnown RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 RGS14O43566 566 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 B4GALT2O60909 372 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 PRKRAO75569 313 aaKnown RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 FAM58BPP0C7Q3 252 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 TIA1P31483 386 aaKnown RBP eCLIP11.25□□□□□ -0.613e-14■■□□□ 12.5
LSM2-208ENST00000375661 PEX19P40855 299 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 BTG2P78543 158 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 ACSM2AQ08AH3 577 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 MYBPHQ13203 477 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 PDCD2Q16342 344 aaPredicted RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 RFTN2Q52LD8 501 aaPredicted RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 SPIN4Q56A73 249 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 EMC4Q5J8M3 183 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 CCNYL2Q5T2Q4 361 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 ACSM2BQ68CK6 577 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 C18orf63Q68DL7 685 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 GALNT18Q6P9A2 607 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 CYP20A1Q6UW02 462 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 PAGE2Q7Z2X7 111 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 GPR180Q86V85 440 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 KIRREL3Q8IZU9 778 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 TMEM156Q8N614 296 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 FAM47BQ8NA70 645 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 B3GNT7Q8NFL0 401 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 OR52N2Q8NGI0 321 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 TM4SF18Q96CE8 201 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 FCRL1Q96LA6 429 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 C7orf26Q96N11 449 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 LRTM1Q9HBL6 345 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 TIMMDC1Q9NPL8 285 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 LYARQ9NX58 379 aaKnown RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 MARCOQ9UEW3 520 aaPredicted RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 GIMAP2Q9UG22 337 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 MCM8Q9UJA3 840 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 PPIEQ9UNP9 301 aaKnown RBP11.25□□□□□ -0.61
LSM2-208ENST00000375661 CLDN16Q9Y5I7 305 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 ATP6AP2A0A1C7CYW4 349 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 WASHC1A8K0Z3 465 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 TGFBR3LH3BV60 316 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 ACOT7O00154 380 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 ZNF195O14628 629 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 BCKDKO14874 412 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 PROM1O43490 865 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 PCDH7O60245 1069 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 ITGA10O75578 1167 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 ATP6AP2O75787 350 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 KITP10721 976 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 FOSL1P15407 271 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 KLK2P20151 261 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 CPN2P22792 545 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 RFC3P40938 356 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 HK2P52789 917 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 NUP107P57740 925 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 TNFRSF17Q02223 184 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 PMPCAQ10713 525 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 NOXRED1Q6NXP6 359 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 MAVSQ7Z434 540 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 CCDC71Q8IV32 467 aaPredicted RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 WDR75Q8IWA0 830 aaKnown RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 SCUBE1Q8IWY4 988 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 APCDD1LQ8NCL9 501 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 OR5M3Q8NGP4 307 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 PIWIL2Q8TC59 973 aaKnown RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 METTL2AQ96IZ6 378 aaKnown RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 PPP1R36Q96LQ0 422 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 CCT7Q99832 543 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 EBPLQ9BY08 206 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 NUF2Q9BZD4 464 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 C1orf109Q9NX04 203 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 TEX10Q9NXF1 929 aaPredicted RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 DNAJB12Q9NXW2 375 aaKnown RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 PHF11Q9UIL8 331 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 YARS2Q9Y2Z4 477 aaKnown RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
LSM2-208ENST00000375661 POLR3HQ9Y535 204 aaPredicted RBP11.24□□□□□ -0.61
LSM2-208ENST00000375661 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 FIGNL2A6NMB9 653 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 HDAC3O15379 428 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 CTNSO60931 367 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 PEX11AO75192 247 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 SEC22BO75396 215 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 CTAG2O75638 210 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 AIFM1O95831 613 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 TACR1P25103 407 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 ACVR2AP27037 513 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 ZFP36L2P47974 494 aaKnown RBP11.23□□□□□ -0.61
LSM2-208ENST00000375661 SSR4P51571 173 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 MAPK12P53778 367 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 TRA2BP62995 288 aaKnown RBP11.23□□□□□ -0.61
LSM2-208ENST00000375661 RPL38P63173 70 aaKnown RBP11.23□□□□□ -0.61
LSM2-208ENST00000375661 SLC25A35Q3KQZ1 300 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 GALNTL6Q49A17 601 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms