RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 AKAP8O43823 692 aaKnown RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 MT-ND2P03891 347 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 RLN1P04808 185 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 RETP07949 1114 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 MSANTD1Q6ZTZ1 278 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 PATE1Q8WXA2 126 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 RDH12Q96NR8 316 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 DCAF13Q9NV06 445 aaKnown RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 PCDHGB7Q9Y5F8 929 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 H0YAE9 185 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 H0YIV9 168 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 PRKRAO75569 313 aaKnown RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 ARRB2P32121 409 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 STAT5AP42229 794 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 OR1D4P47884 311 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 TXNL4AP83876 142 aaKnown RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 CBX3Q13185 183 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 SYPL1Q16563 259 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM151BQ8IW70 566 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 GAL3ST3Q96A11 431 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 LGR4Q9BXB1 951 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 GPR52Q9Y2T5 361 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 FABP12A6NFH5 140 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 ANXA2P2A6NMY6 339 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 ACOX3O15254 700 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 ANXA2P07355 339 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 PRKAR1AP10644 381 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC6A6P31641 620 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 CDKN2CP42773 168 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 RAB14P61106 215 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 PLGLB1Q02325 96 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 LYSMD4Q5XG99 296 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 FAM219BQ5XKK7 198 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SPRED2Q7Z698 418 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 NRMQ8IXM6 262 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 MARVELD2Q8N4S9 558 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 IQCF1Q8N6M8 205 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 OR6N1Q8NGY5 312 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 LRR1Q96L50 414 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SERINC2Q96SA4 455 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 LPAR4Q99677 370 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 TM9SF2Q99805 663 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SRA1Q9HD15 236 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 TEX10Q9NXF1 929 aaPredicted RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 ARFIP1P53367 373 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 KIAA0895LQ68EN5 471 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 NIPAL1Q6NVV3 410 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC36A4Q6YBV0 504 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 FANK1Q8TC84 345 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 HDAC2Q92769 488 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 MYNNQ9NPC7 610 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 RNF13O43567 381 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 CTSLP07711 333 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 FAM69BQ5VUD6 431 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 VWA5B2Q8N398 1253 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 GNPDA2Q8TDQ7 276 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 ARMC1Q9NVT9 282 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 OBP2AQ9NY56 170 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 GRHPRQ9UBQ7 328 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 PEX16Q9Y5Y5 336 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SOBPA7XYQ1 873 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 M0R129 80 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 GFRA2O00451 464 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 SNPHO15079 494 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 NAA10P41227 235 aaPredicted RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC6A9P48067 706 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 NR0B1P51843 470 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 MVKQ03426 396 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 GPR18Q14330 331 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 OR2AJ1Q8NGZ0 328 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 FAM46AQ96IP4 442 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 KCTD7Q96MP8 289 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 POLDIP3Q9BY77 421 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 PTGES2Q9H7Z7 377 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 ZFR2Q9UPR6 939 aaKnown RBP17■□□□□ 0.31
PTPDC1-202ENST00000375360 ERVK-19Q9WJR5 959 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 CEP250Q9BV73 2442 aa17■□□□□ 0.31
PTPDC1-202ENST00000375360 DNAJC13O75165 2243 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 FOXD2O60548 495 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 GKN3PP0CG01 181 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ADORA3P0DMS8 318 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 EDNRAP25101 427 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ADPRHP54922 357 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 MLF2Q15773 248 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ADAMTSL4Q6UY14 1074 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 L3MBTL4Q8NA19 623 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 GOLM1Q8NBJ4 401 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ELSPBP1Q96BH3 223 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 C6orf106Q9H6K1 298 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 MTHFD2LQ9H903 347 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SIT1Q9Y3P8 196 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 NPIPA5E9PKD4 350 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SEMA3DO95025 777 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 PLGP00747 810 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 CNR2P34972 360 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 CASRP41180 1078 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ALG10BQ5I7T1 473 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms