RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SAMD8Q96LT4 415 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 JSRP1Q96MG2 331 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 DPH1Q9BZG8 443 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 EXO5Q9H790 373 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 B3GNT3Q9Y2A9 372 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 RENP00797 406 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 EIF2B5Q13144 721 aaKnown RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MANEALQ5VSG8 457 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FIGNL1Q6PIW4 674 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 AMIGO1Q86WK6 493 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MS4A4AQ96JQ5 239 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 CCDC115Q96NT0 180 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 DGAT2Q96PD7 388 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 RAB11FIP5Q9BXF6 653 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TRIM2Q9C040 744 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SLC25A18Q9H1K4 315 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 BRF2Q9HAW0 419 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 RGS17Q9UGC6 210 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 NDRG2Q9UN36 371 aaKnown RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 GRIP1Q9Y3R0 1128 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 A0A1W2PQ09 198 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 OR2AT4A6NND4 320 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF670-ZNF695F2Z2N8 137 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 GOSR2O14653 212 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF432O94892 652 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 POLR2CP19387 275 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TGM4P49221 684 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 EFR3AQ14156 821 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FLYWCH1Q4VC44 716 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 KLHL26Q53HC5 615 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MEDAGQ5VYS4 303 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SFRP4Q6FHJ7 346 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 ELMOD2Q8IZ81 293 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF676Q8N7Q3 588 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 NAXEQ8NCW5 288 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SRFBP1Q8NEF9 429 aaKnown RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 OR51A7Q8NH64 312 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SLC39A13Q96H72 371 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MYEF2Q9P2K5 600 aaKnown RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SH3D21A4FU49 640 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 CTDSP2O14595 271 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TEX28O15482 410 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 ITGA10O75578 1167 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 PPP1R3DO95685 299 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MAP3K8P41279 467 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MLLT3P42568 568 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FNTBP49356 437 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FAAH2Q6GMR7 532 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 ANKRD54Q6NXT1 300 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 NRROSQ86YC3 692 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FOXRED2Q8IWF2 684 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SLC41A3Q96GZ6 507 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 NIPSNAP1Q9BPW8 284 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SGIP1Q9BQI5 828 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 AMBRA1Q9C0C7 1298 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SLC6A16Q9GZN6 736 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 LINC00597Q9H2U6 94 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 BTNL2Q9UIR0 455 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 COL4A5P29400 1685 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MAS1P04201 325 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 RHOP08100 348 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 H2AFB2P0C5Z0 115 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 UQCRC1P31930 480 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 HBA1P69905 142 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TLE2Q04725 743 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 POU4F3Q15319 338 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 SOWAHCQ53LP3 525 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 KLHL24Q6TFL4 600 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 PTRH1Q86Y79 214 aaKnown RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TEX26Q8N6G2 289 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TRMT10AQ8TBZ6 339 aaKnown RBP6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FCAMRQ8WWV6 532 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 C5orf34Q96MH7 638 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MED20Q9H944 212 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 TRPV4Q9HBA0 871 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 MGAT4AQ9UM21 535 aa6.22□□□□□ -1.41
SMC1A-202ENST00000375340 FAM171A2A8MVW0 826 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 CCL5P13501 91 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 LIPAP38571 399 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 TAS2R38P59533 333 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 ATXN7L3Q14CW9 347 aaPredicted RBP6.21□□□□□ -1.41
SMC1A-202ENST00000375340 TMEM44Q2T9K0 475 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 LRRC37A5PQ49AS3 106 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 SLC25A24Q6NUK1 477 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 CBLL1Q75N03 491 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 DNAJC22Q8N4W6 341 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 CCDC120Q96HB5 630 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 KMOO15229 486 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF623O75123 536 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 RCBTB2O95199 551 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 PRLP01236 227 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 AOAHP28039 575 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 GCGRP47871 477 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 KCTD9Q7L273 389 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 GID4Q8IVV7 300 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 OR10H5Q8NGA6 315 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 OR5M11Q96RB7 305 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF300Q96RE9 604 aaPredicted RBP6.21□□□□□ -1.41
SMC1A-202ENST00000375340 ARNT2Q9HBZ2 717 aa6.21□□□□□ -1.41
SMC1A-202ENST00000375340 MGAT4CQ9UBM8 478 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms