RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 AADACL4Q5VUY2 407 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 NIPAL3Q6P499 406 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 NRROSQ86YC3 692 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 C7orf61Q8IZ16 206 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 GALNT11Q8NCW6 608 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 MTHFD2LQ9H903 347 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 NEDD8-MDP1E9PL57 170 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 IRF6O14896 467 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PTPN2P17706 415 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 BCL2A1Q16548 175 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PRAMEF8Q5VWM4 474 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PRAMEF7Q5VXH5 474 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 OR13C4Q8NGS5 318 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 GLYATL1Q969I3 302 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 DPCDQ9BVM2 203 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 CA12O43570 354 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PNMTP11086 282 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ACP2P11117 423 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SYPL2Q5VXT5 272 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C3orf49Q96BT1 292 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CMKLR1Q99788 373 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 EVLQ9UI08 416 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SORCS1Q8WY21 1168 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 MRGPRX2Q96LB1 330 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 UHRF1Q96T88 793 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 FBRSQ9HAH7 460 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ZFR2Q9UPR6 939 aaKnown RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 DLGAP4Q9Y2H0 992 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 WIF1Q9Y5W5 379 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CLCA3PQ9Y6N3 262 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 MYBPHLA2RUH7 354 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ARRDC5A6NEK1 342 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SLC22A5O76082 557 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 AHSA1O95433 338 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 DIRAS3O95661 229 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 GPX3P22352 226 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 HLA-FP30511 346 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CCDC71Q8IV32 467 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 B3GNT7Q8NFL0 401 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 RPL3LQ92901 407 aaKnown RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 GPR45Q9Y5Y3 372 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 RPP30P78346 268 aaKnown RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 OR8J2Q8NGG1 315 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SLC12A9Q9BXP2 914 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PLCXD1Q9NUJ7 323 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ASB6Q9NWX5 421 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C19orf25Q9UFG5 118 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ATG4BQ9Y4P1 393 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 TRIM64A6NGJ6 449 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 TRIM64BA6NI03 449 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C1QBP02746 253 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 HRGP04196 525 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 UBL4AP11441 157 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 LRRC25Q8N386 305 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 BRIX1Q8TDN6 353 aaKnown RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PRRC1Q96M27 445 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PINK1Q9BXM7 581 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ZBTB20Q9HC78 741 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PLCH1Q4KWH8 1693 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 A0A0G2JLL6 359 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CDC7O00311 574 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PRRT2Q7Z6L0 340 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CRYGNQ8WXF5 182 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ASB17Q8WXJ9 295 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 MCHR1Q99705 422 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 RHBGQ9H310 441 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 IL20Q9NYY1 176 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SCML1Q9UN30 329 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C13orf42A0A1B0GVH6 325 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SMLR1H3BR10 107 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 TFPTP0C1Z6 253 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C1GALT1C1LP0DN25 315 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CHRNB1P11230 501 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 POU3F3P20264 500 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 NFYAP23511 347 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PLK5Q496M5 336 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SLC2A12Q8TD20 617 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ADAP2Q9NPF8 381 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 KCNJ16Q9NPI9 418 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 THSD1Q9NS62 852 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 PADI3Q9ULW8 664 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 WEE1P30291 646 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CD52P31358 61 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 RAB11BQ15907 218 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 ATAD3CQ5T2N8 411 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 UBE2UQ5VVX9 321 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C5orf46Q6UWT4 87 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 GTF2H4Q92759 462 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 C10orf90Q96M02 699 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CLMPQ9H6B4 373 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CD300AQ9UGN4 299 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SSX4O60224 188 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 CRTAPO75718 401 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-204ENST00000375290 MAP2K4P45985 399 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 MTNR1BP49286 362 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 RANBP10Q6VN20 620 aa9.72□□□□□ -0.85
PTCH1-204ENST00000375290 SLC29A4Q7RTT9 530 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms