RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 GARNL3Q5VVW2 1013 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 ARSKQ6UWY0 536 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 KIAA1324Q6UXG2 1013 aaKnown RBP7.77□□□□□ -1.17
UBR4-202ENST00000375224 AMIGO1Q86WK6 493 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 STX12Q86Y82 276 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 LINC00518Q8N0U6 118 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 TMEM145Q8NBT3 493 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 GALNT11Q8NCW6 608 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 OR13F1Q8NGS4 319 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 BBS4Q96RK4 519 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 NODALQ96S42 347 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 PITX2Q99697 317 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 GDF15Q99988 308 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 GON7Q9BXV9 100 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 GABARAPL3Q9BY60 117 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 ZNF556Q9HAH1 456 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 RAB23Q9ULC3 237 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 POFUT2Q9Y2G5 429 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 LYVE1Q9Y5Y7 322 aa7.77□□□□□ -1.17
UBR4-202ENST00000375224 TMEM229AB2RXF0 380 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 PRSS44E7EML9 344 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SEC14L2O76054 403 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 OPN1SWP03999 348 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 IFNW1P05000 195 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 HMGN1P05114 100 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 JUNDP17535 347 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 GPC1P35052 558 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 RPS15AP62244 130 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 NFATC3Q12968 1075 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 HSPB3Q12988 150 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 DUSP7Q16829 419 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 CTU2Q2VPK5 515 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 INAVAQ3KP66 663 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 FAM124AQ86V42 546 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 MMP21Q8N119 569 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SFXN5Q8TD22 340 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 MS4A6EQ96DS6 147 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 MSANTD3Q96H12 275 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 MSLNLQ96KJ4 702 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 MRGPRX1Q96LB2 322 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 DACH2Q96NX9 599 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 BARD1Q99728 777 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 NRTNQ99748 197 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 PIP5K1AQ99755 562 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 WACQ9BTA9 647 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ROGDIQ9GZN7 287 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SLC6A20Q9NP91 592 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 LYARQ9NX58 379 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBR4-202ENST00000375224 HS3ST3A1Q9Y663 406 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ENPP4Q9Y6X5 453 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 POM121BA6NF01 834 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 TMX2-CTNND1H3BSU7 103 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ERI3O43414 337 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 IFI30P13284 250 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 CD247P20963 164 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 HIST1H1TP22492 207 aaPredicted RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 PPP2R1BP30154 601 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 CASP9P55211 416 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 RGS1Q08116 209 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 MICAQ29983 383 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 FAM209BQ5JX69 171 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ABHD17CQ6PCB6 329 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 TMEM64Q6YI46 380 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 PLD3Q8IV08 490 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SVOPQ8N4V2 548 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 BPIFB6Q8NFQ5 453 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 OR10G2Q8NGC3 310 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 IPCEF1Q8WWN9 437 aaPredicted RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 OR1E3Q8WZA6 343 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 AKAP1Q92667 903 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBR4-202ENST00000375224 PROX1Q92786 737 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SLC35G5Q96KT7 338 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 TEFMQ96QE5 360 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 SPATA5L1Q9BVQ7 753 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 TEX10Q9NXF1 929 aaPredicted RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 ENTPD4Q9Y227 616 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 NAALAD2Q9Y3Q0 740 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ZNF175Q9Y473 711 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 PCDHGB1Q9Y5G3 927 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 CHD9Q3L8U1 2897 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 B4GAT1O43505 415 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 APOA1P02647 267 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 CHRM5P08912 532 aaPredicted RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 POLR2IP36954 125 aaKnown RBP7.76□□□□□ -1.17
UBR4-202ENST00000375224 XCR1P46094 333 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 HMGA2P52926 109 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SLAMF1Q13291 335 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 KIR2DS3Q14952 304 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 LAPTM4AQ15012 233 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ESCO2Q56NI9 601 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 TOR1AIP1Q5JTV8 583 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 ZNF425Q6IV72 752 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 FAM92BQ6ZTR7 304 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 HORMAD2Q8N7B1 307 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 RAB2BQ8WUD1 216 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 PHF21AQ96BD5 680 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 HRASLS5Q96KN8 279 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SRMSQ9H3Y6 488 aa7.76□□□□□ -1.17
UBR4-202ENST00000375224 SLAMF7Q9NQ25 335 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms