RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 MSANTD3Q96H12 275 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 MYADMQ96S97 322 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 C17orf62Q9BQA9 187 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 ELL3Q9HB65 397 aaPredicted RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 DOCK6Q96HP0 2047 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 UBL4AP11441 157 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 AOAHP28039 575 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 DUSP3P51452 185 aaPredicted RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 ZNF234Q14588 700 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 SHFQ7M4L6 423 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 KRTCAP2Q8N6L1 136 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CASD1Q96PB1 797 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CCNL2Q96S94 520 aaPredicted RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 TTYH2Q9BSA4 534 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 GABARAPL1Q9H0R8 117 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 NUBP2Q9Y5Y2 271 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CACNG3O60359 315 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.81e-10■■■□□ 17.4
PGK1-201ENST00000373316 RHOP08100 348 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CD63P08962 238 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 UCHL1P09936 223 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 BMP1P13497 986 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 TSPAN5P62079 268 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 ANKDD1AQ495B1 522 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 KCTD20Q7Z5Y7 419 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 LACC1Q8IV20 430 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 SPARTQ8N0X7 666 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 PNPLA1Q8N8W4 532 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 DAZLQ92904 295 aaKnown RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 VWCEQ96DN2 955 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CPPED1Q9BRF8 314 aaPredicted RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 PRTFDC1Q9NRG1 225 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 ASB6Q9NWX5 421 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 OBP2AQ9NY56 170 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 EMC3Q9P0I2 261 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 UBQLN2Q9UHD9 624 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 LAMP5Q9UJQ1 280 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 L7N2F9 121 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 S100A6P06703 90 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CD97P48960 835 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 LETMD1Q6P1Q0 360 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 COMMD6Q7Z4G1 85 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 TMEM102Q8N9M5 508 aaPredicted RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 OR6K6Q8NGW6 343 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 OR2L2Q8NH16 312 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 CNIH3Q8TBE1 160 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 ASB11Q8WXH4 323 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 ORAI3Q9BRQ5 295 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 THSD1Q9NS62 852 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 NKIRAS2Q9NYR9 191 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 GDE1Q9NZC3 331 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 ZNF224Q9NZL3 707 aa10.08□□□□□ -0.8
PGK1-201ENST00000373316 C14orf166Q9Y224 244 aaKnown RBP10.08□□□□□ -0.8
PGK1-201ENST00000373316 XPNPEP2O43895 674 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 ASGR2P07307 311 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 TRAPPC2P0DI81 140 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 TRAPPC2BP0DI82 140 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 CRHBPP24387 322 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 MASP1P48740 699 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 DSC1Q08554 894 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 LASP1Q14847 261 aaKnown RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 PRAMEF17Q5VTA0 474 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 FIP1L1Q6UN15 594 aaKnown RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 XKR5Q6UX68 686 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 SLC39A11Q8N1S5 342 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 OR52B6Q8NGF0 335 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 CLIP3Q96DZ5 547 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 ZNF578Q96N58 590 aaPredicted RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 LRFN5Q96NI6 719 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 CMKLR1Q99788 373 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 LHPPQ9H008 270 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 IL26Q9NPH9 171 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 EXTL2Q9UBQ6 330 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 ACSL6Q9UKU0 697 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 EME2A4GXA9 379 aaPredicted RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 HHLA1C9JL84 531 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 SYT5O00445 386 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 S1PR1P21453 382 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 FRKP42685 505 aaPredicted RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 HK3P52790 923 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 WDR5P61964 334 aaKnown RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 AMZ1Q400G9 498 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 FLYWCH1Q4VC44 716 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 SMARCD3Q6STE5 483 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 OR2T4Q8NH00 348 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 TRIM43Q96BQ3 446 aaPredicted RBP10.07□□□□□ -0.8
PGK1-201ENST00000373316 P2RY13Q9BPV8 354 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 TRPV4Q9HBA0 871 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 PADI2Q9Y2J8 665 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 ALG5Q9Y673 324 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 AGAP5A6NIR3 686 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 M0R233 179 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 TP53I11O14683 189 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 ZNF208O43345 1280 aa10.07□□□□□ -0.8
PGK1-201ENST00000373316 RP2O75695 350 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms