RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 ADIPOR2Q86V24 386 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 VN1R2Q8NFZ6 395 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 UCN3Q969E3 161 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 TM4SF18Q96CE8 201 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 SLC46A2Q9BY10 475 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 KLHL21Q9UJP4 597 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 FAM240BA0A1B0GVZ2 78 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 TMEM129A0AVI4 362 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 K7ESM1 405 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 HLA-DQB1P01920 261 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 ACP2P11117 423 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 SREBF2Q12772 1141 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 KLHL22Q53GT1 634 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LIPIQ6XZB0 460 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 DPPA4Q7L190 304 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 XAGE5Q8WWM1 108 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 NEUROD4Q9HD90 331 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 MCUBQ9NWR8 336 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 KIF26AQ9ULI4 1882 aaPredicted RBP15.47■□□□□ 0.07
SDC4-201ENST00000372733 SHISA3A0PJX4 238 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 TEX28O15482 410 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LYRM1O43325 122 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 NTN1O95631 604 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 FAM157BP0CG42 384 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LIMS3P0CW19 117 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LIMS4P0CW20 117 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 GABRA5P31644 462 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 MMP12P39900 470 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 AVPR1BP47901 424 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 SLC6A11P48066 632 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 P2RX3P56373 397 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 CDK5Q00535 292 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 MAP4K2Q12851 820 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 WSCD2Q2TBF2 565 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 SLC25A30Q5SVS4 291 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LHFPL3Q86UP9 236 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LSRQ86X29 649 aaPredicted RBP15.47■□□□□ 0.07
SDC4-201ENST00000372733 TBC1D19Q8N5T2 526 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 MORN4Q8NDC4 146 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 OR4M1Q8NGD0 313 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 OR6T1Q8NGN1 323 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 DEDD2Q8WXF8 326 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 ZNF689Q96CS4 500 aaPredicted RBP15.47■□□□□ 0.07
SDC4-201ENST00000372733 TMED9Q9BVK6 235 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 TRPC4Q9UBN4 977 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 GSTK1Q9Y2Q3 226 aa15.47■□□□□ 0.07
SDC4-201ENST00000372733 LOC102723532A0A0G2JNH3 316 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 PRODHO43272 600 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 LILRB5O75023 590 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 EPPINO95925 133 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 DDX5P17844 614 aaKnown RBP15.46■□□□□ 0.07
SDC4-201ENST00000372733 RAB25P57735 213 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 EFNB1P98172 346 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 OR8D4Q8NGM9 314 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 TMEM163Q8TC26 289 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 SENP5Q96HI0 755 aaPredicted RBP15.46■□□□□ 0.07
SDC4-201ENST00000372733 ATF6BQ99941 703 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 SOSTQ9BQB4 213 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 PRR14Q9BWN1 585 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 HDHD5Q9BXW7 423 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 OR51I1Q9H343 314 aa15.46■□□□□ 0.07
SDC4-201ENST00000372733 FGF20Q9NP95 211 aaPredicted RBP15.46■□□□□ 0.07
SDC4-201ENST00000372733 TEX10Q9NXF1 929 aaPredicted RBP15.46■□□□□ 0.07
SDC4-201ENST00000372733 C1QBP02746 253 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 NR2F1P10589 423 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 PRKAR1AP10644 381 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 ACADMP11310 421 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 MTNR1AP48039 350 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 CCT3P49368 545 aaKnown RBP15.46■□□□□ 0.06
SDC4-201ENST00000372733 SMSP52788 366 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 RAB40BQ12829 278 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 COX10Q12887 443 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 MZT2BQ6NZ67 158 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 SLC36A4Q6YBV0 504 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 LIX1LQ8IVB5 337 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 UBE2E3Q969T4 207 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 TRIM45Q9H8W5 580 aaPredicted RBP15.46■□□□□ 0.06
SDC4-201ENST00000372733 TBC1D17Q9HA65 648 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 GALNT9Q9HCQ5 603 aa15.46■□□□□ 0.06
SDC4-201ENST00000372733 A0A0G2JN53 185 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 CXorf51AA0A1B0GTR3 108 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 ARHGEF9O43307 516 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 PROM1O43490 865 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 SOD1P00441 154 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 BSGP35613 385 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 CLDN20P56880 219 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 PCBP4P57723 403 aaKnown RBP15.45■□□□□ 0.06
SDC4-201ENST00000372733 NDUFA9Q16795 377 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 CEP78Q5JTW2 689 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 CLEC12AQ5QGZ9 265 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 KHDRBS2Q5VWX1 349 aaKnown RBP15.45■□□□□ 0.06
SDC4-201ENST00000372733 CD300LDQ6UXZ3 194 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 FAM129CQ86XR2 697 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 MARCH9Q86YJ5 346 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 SLC39A11Q8N1S5 342 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 ANKRD53Q8N9V6 530 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 ZC3HAV1LQ96H79 300 aaKnown RBP15.45■□□□□ 0.06
SDC4-201ENST00000372733 NIPAL2Q9H841 368 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 P2RX2Q9UBL9 471 aa15.45■□□□□ 0.06
SDC4-201ENST00000372733 ISM1B1AKI9 464 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms