RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CASP2P42575 452 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 RORCP51449 518 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 EMX2Q04743 252 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 SLC3A1Q07837 685 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 CAMK2DQ13557 499 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 NFYCQ13952 458 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 PPA1Q15181 289 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 RNF212Q495C1 297 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 RSPO2Q6UXX9 243 aaPredicted RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 RBMS3Q6XE24 437 aaKnown RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 SSX9Q7RTT3 188 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 TRMT11Q7Z4G4 463 aaKnown RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 MILR1Q7Z6M3 343 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 SLC44A2Q8IWA5 706 aaPredicted RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 ADHFE1Q8IWW8 467 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 ENTHD1Q8IYW4 607 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 CARFQ8N187 725 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 MIER2Q8N344 545 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 SPATA6LQ8N4H0 392 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 CREB3L4Q8TEY5 395 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 TADA1Q96BN2 335 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 CASD1Q96PB1 797 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 SEPT5Q99719 369 aaPredicted RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 OMDQ99983 421 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 H2AFJQ9BTM1 129 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 GSDMCQ9BYG8 508 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 WNT10AQ9GZT5 417 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 RNF32Q9H0A6 362 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 GABARAPL1Q9H0R8 117 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 EVA1AQ9H8M9 152 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 FBRSL1Q9HCM7 1045 aaKnown RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF334Q9HCZ1 680 aaPredicted RBP8.4□□□□□ -1.07
ATG4A-203ENST00000372232 MARCH5Q9NX47 278 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 NDUFAF4Q9P032 175 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 XPR1Q9UBH6 696 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 SSR3Q9UNL2 185 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 PCDHB7Q9Y5E2 793 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 CDH10Q9Y6N8 788 aa8.4□□□□□ -1.07
ATG4A-203ENST00000372232 NYNRINQ9P2P1 1898 aaKnown RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 C7orf66A4D0T2 115 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ANKDD1BA6NHY2 528 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ARVCFO00192 962 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 GNGT2O14610 69 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 PQBP1O60828 265 aaKnown RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 RAMP2O60895 175 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 MITFO75030 526 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 CREG1O75629 220 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 CXCL14O95715 111 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 GLUD1P00367 558 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 HMBSP08397 361 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ZDHHC11BP0C7U3 371 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 SPP1P10451 314 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 PRKACGP22612 351 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ATP5A1P25705 553 aaKnown RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 GATMP50440 423 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 AP1S1P61966 158 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 GPNMBQ14956 572 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 SEC23BQ15437 767 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF284Q2VY69 593 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 FRMPD3Q5JV73 1810 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 MLIPQ5VWP3 458 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 UBE3DQ7Z6J8 389 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 PGBD5Q8N414 524 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 DTWD1Q8N5C7 304 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 C19orf18Q8NEA5 215 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 DBF4BQ8NFT6 615 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ARRDC2Q8TBH0 407 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 WDR20Q8TBZ3 569 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 APH1BQ8WW43 257 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 MSLNLQ96KJ4 702 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 CMSS1Q9BQ75 279 aaKnown RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 MRPL57Q9BQC6 102 aaKnown RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ASPNQ9BXN1 380 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 MIXL1Q9H2W2 232 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 EML4Q9HC35 981 aaKnown RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 TNFRSF12AQ9NP84 129 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 PLCXD1Q9NUJ7 323 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 PSORS1C1Q9UIG5 152 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 ATXN7L1Q9ULK2 861 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 BTRCQ9Y297 605 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 FIS1Q9Y3D6 152 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 BACE2Q9Y5Z0 518 aa8.39□□□□□ -1.07
ATG4A-203ENST00000372232 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-203ENST00000372232 A0A087X1B8 175 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 A0A096LPI6 279 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 A0A1B0GVI7 797 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 LOC285095A0A1B0GVY8 99 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PSMD9O00233 223 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 GADD45GO95257 159 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 HRGP04196 525 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 TSPAN19P0C672 248 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 HNRNPLP14866 589 aaKnown RBP eCLIP8.38□□□□□ -1.078e-11■■■□□ 18.4
ATG4A-203ENST00000372232 MUC1P15941 1255 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF8P17098 575 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 GGT1P19440 569 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 DDX6P26196 483 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 STOMP27105 288 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 C21orf33P30042 268 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 OR1E1P30953 314 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms