RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PSMD9O00233 223 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 BPIP17213 487 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 PSMA6P60900 246 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 MAPK14Q16539 360 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ABCA11PQ4W5N1 156 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 NDUFAF5Q5TEU4 345 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 LYSMD4Q5XG99 296 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 BEND4Q6ZU67 534 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 USP53Q70EK8 1073 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC15A3Q8IY34 581 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 PTGES2Q9H7Z7 377 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR2B3O76000 313 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 RASGEF1BQ0VAM2 473 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 CYBRD1Q53TN4 286 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 C6orf141Q5SZD1 244 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 PSAPL1Q6NUJ1 521 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC16A9Q7RTY1 509 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 COMMD7Q86VX2 200 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 NPWQ8N729 165 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR4Q3Q8NH05 313 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 PHOSPHO1Q8TCT1 267 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 RBCK1Q9BYM8 510 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 B3GNT4Q9C0J1 378 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 DFNA5O60443 496 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF763Q0D2J5 394 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 SPANXN4Q5MJ08 99 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR52E4Q8NGH9 312 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 PMM1Q92871 262 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 SCRN2Q96FV2 425 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 PTCHD1Q96NR3 888 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 PAK1IP1Q9NWT1 392 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 M0R233 179 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 DIRAS1O95057 198 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 EDN1P05305 212 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 HTR1EP28566 365 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 HMGCLP35914 325 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 AGTR2P50052 363 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 GABARAPL2P60520 117 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 HNRNPA0Q13151 305 aaKnown RBP12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 SCML4Q8N228 414 aa12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 DNMT3BQ9UBC3 853 aaKnown RBP12.71□□□□□ -0.37
RAPGEF1-201ENST00000372189 INMT-MINDY4F8WBC2 141 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 GP1BBP13224 206 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 HTR2BP41595 481 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 KCNC1P48547 511 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ST3GAL3Q11203 375 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 MEDAGQ5VYS4 303 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 NLRP8Q86W28 1048 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF227Q86WZ6 799 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 C7orf57Q8NEG2 295 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 SHKBP1Q8TBC3 707 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 NXPE2Q96DL1 559 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 TIGARQ9NQ88 270 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 PRODH2Q9UF12 536 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF860A6NHJ4 632 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 S1PR4O95977 384 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 IL7P13232 177 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF20P17024 532 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ERVFC1P60507 584 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 NCS1P62166 190 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF674Q2M3X9 581 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 KIAA0319Q5VV43 1072 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 NANOGP8Q6NSW7 305 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 SNX29P2Q8IUI4 249 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 NPAS3Q8IXF0 933 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 PLD6Q8N2A8 252 aaKnown RBP12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 CSNK1A1LQ8N752 337 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 MOAP1Q96BY2 351 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 KCNA7Q96RP8 456 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 R3HDMLQ9H3Y0 253 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 NANOGQ9H9S0 305 aa12.71□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF670-ZNF695F2Z2N8 137 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 CD1DP15813 335 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PORP16435 677 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 ITGB7P26010 798 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 HLCSP50747 726 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 TBPL1P62380 186 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 LRP8Q14114 963 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 COQ8BQ96D53 544 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 MEAF6Q9HAF1 191 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 SMURF1Q9HCE7 757 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 POLE4Q9NR33 117 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PSAT1Q9Y617 370 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 GLOD5A6NK44 160 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 J3QLW9 94 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 BCAS1O75363 584 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 C6orf47O95873 294 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 WDPCPO95876 746 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 JUPP14923 745 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF19P17023 458 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 GCH1P30793 250 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 RPS15P62841 145 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 KCNAB2Q13303 367 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms