RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TFPIP10646 304 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 IFI30P13284 250 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OSMP13725 252 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ITGB8P26012 769 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC6A6P31641 620 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CCKBRP32239 447 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 DUSP3P51452 185 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 BMXP51813 675 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ARPC4P59998 168 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CSNK1G2P78368 415 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SHC2P98077 582 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ST3GAL4Q11206 333 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ANKDD1AQ495B1 522 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ZFP69Q49AA0 526 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PYCR3Q53H96 274 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CLEC12AQ5QGZ9 265 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PIP5KL1Q5T9C9 394 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PRSS48Q7RTY5 328 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 GID4Q8IVV7 300 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PRSS58Q8IYP2 241 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 DEFB119Q8N690 84 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 WDR20Q8TBZ3 569 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PIK3R3Q92569 461 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 DAZLQ92904 295 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 COQ8BQ96D53 544 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ITPKCQ96DU7 683 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PTCHD1Q96NR3 888 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TGM7Q96PF1 710 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SMAD5Q99717 465 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SORBS1Q9BX66 1292 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 DCSTAMPQ9H295 470 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OR51V1Q9H2C8 321 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TRPV4Q9HBA0 871 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TAAR2Q9P1P5 351 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 C5AR2Q9P296 337 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 C19orf25Q9UFG5 118 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MMP17Q9ULZ9 603 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PLCL2Q9UPR0 1127 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 EXOSC1Q9Y3B2 195 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PLRG1O43660 514 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SRPX2O60687 465 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PPM1BO75688 479 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SERPINA3P01011 423 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 EGFP01133 1207 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 HMGN2P05204 90 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 GNAO1P09471 354 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CXCR1P25024 350 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CD38P28907 300 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 DSG2Q14126 1118 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CLCA4Q14CN2 919 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TAF13Q15543 124 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CYP27C1Q4G0S4 372 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PRPF38BQ5VTL8 546 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MLIPQ5VWP3 458 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PAMR1Q6UXH9 720 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ETFBKMTQ8IXQ9 262 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ALDH16A1Q8IZ83 802 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF740Q8NDX6 193 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OR10H4Q8NGA5 316 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 GRHL3Q8TE85 626 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 NEURL3Q96EH8 262 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TEX101Q9BY14 249 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 HOXD1Q9GZZ0 328 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TPK1Q9H3S4 243 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 KCNK12Q9HB15 430 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 NEK6Q9HC98 313 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 RPRD1BQ9NQG5 326 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TAS2R7Q9NYW3 318 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 RNF6Q9Y252 685 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MED16Q9Y2X0 877 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SPIN1Q9Y657 262 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 SERTM1A2A2V5 107 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TRIM3O75382 744 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ATE1O95260 518 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 RAB36O95755 333 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 RENP00797 406 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ITIH1P19827 911 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MC3RP41968 323 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CDKN2CP42773 168 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 RORCP51449 518 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CDK5R2Q13319 367 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PUS10Q3MIT2 529 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 CRTC2Q53ET0 693 aaPredicted RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MANEAQ5SRI9 462 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 TPRG1LQ5T0D9 272 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 FAAH2Q6GMR7 532 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PAPD5Q8NDF8 572 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OR2T33Q8NG76 320 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OR10H5Q8NGA6 315 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 OR4K5Q8NGD3 323 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ASB12Q8WXK4 309 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 KCTD7Q96MP8 289 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF559Q9BR84 538 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MOV10Q9HCE1 1003 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 MBNL1Q9NR56 388 aaKnown RBP5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PPT2Q9UMR5 302 aa5.03□□□□□ -1.6
SMNDC1-202ENST00000369603 PRAMEF2O60811 474 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 WISP3O95389 354 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 KLK3P07288 261 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms