RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ERLEC1Q96DZ1 483 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TBL1XR1Q9BZK7 514 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 RSPH9Q9H1X1 276 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 SOX9P48436 509 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 METTL11BQ5VVY1 283 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 PARP16Q8N5Y8 322 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 LILRB4Q8NHJ6 448 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 IGLV3-10A0A075B6K4 115 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 MEIOCA2RUB1 952 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 H7BY64 318 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CHP2O43745 196 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF20P17024 532 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CXCR1P25024 350 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 RBMS1P29558 406 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 PITPNBP48739 271 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CES4AQ5XG92 561 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 KCTD18Q6PI47 426 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■□□□ 13
CDC42BPA-202ENST00000366764 PRAP1Q96NZ9 151 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TBX5Q99593 518 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 DMRT3Q9NQL9 472 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 A0A075B6Q4 140 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 GJB5O95377 273 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CKMT1AP12532 417 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TPRA1Q86W33 373 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 DEDD2Q8WXF8 326 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TRAPPC13A5PLN9 417 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 ANHXE9PGG2 379 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 NPC1O15118 1278 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 NRG3P56975 720 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CAMK1Q14012 370 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 ADAD1Q96M93 576 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM83CQ9BQN1 747 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 A0A1W2PQ45 241 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 A0A1W2PQY0 241 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CNMDO75829 334 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 KRT33AO76009 404 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 GKN3PP0CG01 181 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACVR1Q04771 509 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC25A25Q6KCM7 469 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 ERN2Q76MJ5 926 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC7A13Q8TCU3 470 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 CYB5D2Q8WUJ1 264 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 METTL21AQ8WXB1 218 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.618e-7■■■□□ 18.4
CDC42BPA-202ENST00000366764 DGAT2Q96PD7 388 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 MS4A4EQ96PG1 132 aa11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 NUFIP1Q9UHK0 495 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-202ENST00000366764 LHCGRP22888 699 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 PYCR1P32322 319 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 PSMA6P60900 246 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 DEFB115Q30KQ5 88 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 RTL10Q7L3V2 364 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 FUNDC1Q8IVP5 155 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 C5orf51A6NDU8 294 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 H0YIV9 168 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 INHAP05111 366 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 DBIP07108 87 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 GABRA5P31644 462 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 C3orf38Q5JPI3 329 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC35F1Q5T1Q4 408 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 GLT8D1Q68CQ7 371 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 TCEAL8Q8IYN2 117 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 APIPQ96GX9 242 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 CARS2Q9HA77 564 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 PTPRFP10586 1907 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 PAHP00439 452 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 RORAP35398 523 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 VLDLRP98155 873 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 HDDC3Q8N4P3 179 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACVR1CQ8NER5 493 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR8K5Q8NH50 307 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 OR52P1PQ8NH57 321 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF566Q969W8 418 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 MYOCQ99972 504 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 GABARAPL1Q9H0R8 117 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 HCN3Q9P1Z3 774 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 RBBP9O75884 186 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 FLYWCH1Q4VC44 716 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 SUSD1Q6UWL2 747 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 LCTLQ6UWM7 567 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 PIWIL3Q7Z3Z3 882 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 CACNA1DQ01668 2161 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ADAMTS18Q8TE60 1221 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 THSD1Q9NS62 852 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 MUSKO15146 869 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 IFNA21P01568 189 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 BTN3A2P78410 334 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 CTSL3PQ5NE16 218 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 LY6G5CQ5SRR4 150 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 NUP43Q8NFH3 380 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ACTRT3Q9BYD9 372 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 SLC6A16Q9GZN6 736 aa11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 MTHFD2LQ9H903 347 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-202ENST00000366764 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.22□□□□□ -0.617e-6■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms