RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR1J4Q8NGS1 313 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 ADIPOR1Q96A54 375 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZNF669Q96BR6 464 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 DGAT2Q96PD7 388 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 TNFRSF13CQ96RJ3 184 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 NODALQ96S42 347 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 CCDC68Q9H2F9 335 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 LYRM4Q9HD34 91 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 PAK5Q9P286 719 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 SLC17A6Q9P2U8 582 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 RNF112Q9ULX5 631 aa7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 PRKDCP78527 4128 aaKnown RBP7.63□□□□□ -1.19
HMGB1P39-201ENST00000366304 TP53I11O14683 189 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 SSX4O60224 188 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 ICOSLGO75144 302 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 SH3BGRLO75368 114 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 CLEC3AO75596 197 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 PGRP06401 933 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 CRHP06850 196 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 HIST1H2AGP0C0S8 130 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 SRD5A1P18405 259 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 HIST1H2ADP20671 130 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 KCNJ5P48544 419 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 AP1S2P56377 157 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 THOC5Q13769 683 aaKnown RBP7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 EXOC3L2Q2M3D2 409 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 KBTBD12Q3ZCT8 623 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 FAM120AOSQ5T036 256 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 C18orf63Q68DL7 685 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 ADAM5Q6NVV9 412 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 TRIM40Q6P9F5 258 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 BHLHB9Q6PI77 547 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 RNF111Q6ZNA4 994 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 CCDC89Q8N998 374 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 BBOF1Q8ND07 529 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 OR14L1PQ8NHC6 308 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 SMAP2Q8WU79 429 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 HTRA1Q92743 480 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 HGDQ93099 445 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 CAVIN3Q969G5 261 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 TRMT61AQ96FX7 289 aaKnown RBP7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZNF845Q96IR2 970 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 LCORQ96JN0 433 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 HIST1H2AHQ96KK5 128 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 HIST1H2AJQ99878 128 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 SLC39A3Q9BRY0 314 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 H2AFJQ9BTM1 129 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 SHARPINQ9H0F6 387 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 ACBD3Q9H3P7 528 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 FBXL2Q9UKC9 423 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 DLGAP4Q9Y2H0 992 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
HMGB1P39-201ENST00000366304 ALPK2Q86TB3 2170 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ELOA3CA0A087WX78 387 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 IQANK1A0A1B0GTG1 560 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 C2orf92A0A1B0GVN3 265 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SYNDIG1LA6NDD5 238 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SLC22A20A6NK97 555 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SDR42E2A6NKP2 422 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ELOA3DA6NLF2 546 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CDC7O00311 574 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SAP18O00422 153 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 EMC8O43402 210 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZIC3O60481 467 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 MBD3O95983 291 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CT62P0C5K7 136 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CD8BP10966 210 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ALOX15P16050 662 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CHMP24386 653 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CNTFP26441 200 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 RGS4P49798 205 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SUCLG1P53597 346 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 EEF1A1P68104 462 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 PCDH1Q08174 1060 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 LOXL1Q08397 574 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 NNATQ16517 81 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CYP1B1Q16678 543 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SWI5Q1ZZU3 235 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SPRED3Q2MJR0 410 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ELOA3BQ3SY89 546 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 PDLIM3Q53GG5 364 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 HSP90AA5PQ58FG0 334 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 FBXO48Q5FWF7 155 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 EEF1A1P5Q5VTE0 462 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 CAVIN1Q6NZI2 390 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SEZ6L2Q6UXD5 910 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 SLC29A4Q7RTT9 530 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 PALM2Q8IXS6 379 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 RNF175Q8N4F7 328 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ZNF615Q8N8J6 731 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 ELOA3Q8NG57 546 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 KRT12Q99456 494 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 TRAF4Q9BUZ4 470 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 NXF5Q9H1B4 397 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 MANSC1Q9H8J5 431 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 RNF122Q9H9V4 155 aa7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 RRAGDQ9NQL2 400 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 IARS2Q9NSE4 1012 aaKnown RBP7.61□□□□□ -1.19
HMGB1P39-201ENST00000366304 C20orf96Q9NUD7 363 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms