RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ZNF578Q96N58 590 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-201ENST00000361909 POLDIP3Q9BY77 421 aaKnown RBP18.04■□□□□ 0.48
CMTM3-201ENST00000361909 B3GNT4Q9C0J1 378 aa18.04■□□□□ 0.48
CMTM3-201ENST00000361909 MED28Q9H204 178 aa18.04■□□□□ 0.48
CMTM3-201ENST00000361909 ATP6V1HQ9UI12 483 aa18.04■□□□□ 0.48
CMTM3-201ENST00000361909 PCDHB9Q9Y5E1 797 aa18.04■□□□□ 0.48
CMTM3-201ENST00000361909 SPIN1Q9Y657 262 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-201ENST00000361909 NUP214P35658 2090 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-201ENST00000361909 GLYATL1P3A0A0U1RQE8 302 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 PIPSLA2A3N6 862 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 FABP7O15540 132 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 CHP2O43745 196 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 SOCS5O75159 536 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ZNF821O75541 412 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 IGSF6O95976 241 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 DHFRP00374 187 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ARAFP10398 606 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ETFAP13804 333 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 RPL3P39023 403 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 HYAL1Q12794 435 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 HACD4Q5VWC8 232 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 GPR139Q6DWJ6 353 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 KIAA1211LQ6NV74 962 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 NXPE1Q8N323 547 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 OR2AP1Q8NGE2 309 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 OR52P1PQ8NH57 321 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 NECTIN4Q96NY8 510 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 TEFMQ96QE5 360 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ZSCAN5AQ9BUG6 496 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 PPIL3Q9H2H8 161 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ZFYVE1Q9HBF4 777 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 B3GAT2Q9NPZ5 323 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 GULP1Q9UBP9 304 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 SF3B6Q9Y3B4 125 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 TRDV1A0A1B0GX56 115 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 TRBC2A0A5B9 178 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 RFXAPO00287 272 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ADH1CP00326 375 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ANXA3P12429 323 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 STOMP27105 288 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 SLC6A1P30531 599 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 VASPP50552 380 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 GRK1Q15835 563 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ATXN7L2Q5T6C5 722 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 TMEM65Q6PI78 240 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 LUZP2Q86TE4 346 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ADGRG3Q86Y34 549 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 OR52I1Q8NGK6 324 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 ACOT12Q8WYK0 555 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 HGDQ93099 445 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 CHFRQ96EP1 664 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 PPA2Q9H2U2 334 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 C1GALT1Q9NS00 363 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 MRPS18AQ9NVS2 196 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 CUEDC1Q9NWM3 386 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 TESQ9UGI8 421 aaKnown RBP18.03■□□□□ 0.48
CMTM3-201ENST00000361909 FKBP7Q9Y680 259 aa18.03■□□□□ 0.48
CMTM3-201ENST00000361909 PDE4DIPQ5VU43 2346 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 PIKFYVEQ9Y2I7 2098 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 PRAMEF33A0A0G2JMD5 474 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 MGAT4DA6NG13 374 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 FAM170BA6NMN3 283 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 ISM1B1AKI9 464 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 PRKYO43930 277 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 PRAMEF10O60809 474 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 OR56A5P0C7T3 313 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 SPAM1P38567 509 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 PXDC1Q5TGL8 231 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 ANGPTL8Q6UXH0 198 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 CDH24Q86UP0 819 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 ADIPOR2Q86V24 386 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 COMMD7Q86VX2 200 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 RSPRY1Q96DX4 576 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 GFM1Q96RP9 751 aaKnown RBP18.02■□□□□ 0.48
CMTM3-201ENST00000361909 SLC35A5Q9BS91 424 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 TM6SF2Q9BZW4 377 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 CLEC4MQ9H2X3 399 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-201ENST00000361909 FGF20Q9NP95 211 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-201ENST00000361909 IL26Q9NPH9 171 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 COMMD3Q9UBI1 195 aa18.02■□□□□ 0.48
CMTM3-201ENST00000361909 AGAP14A8MT82 685 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 H0YIV9 168 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 SMLR1H3BR10 107 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 TSC22D2O75157 780 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 SERPINI2O75830 405 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ANXA4P09525 319 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 VIPR2P41587 438 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 IRF8Q02556 426 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 HSF2Q03933 536 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 BCL2L1Q07817 233 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 GANABQ14697 944 aaKnown RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 AANATQ16613 207 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 NDUFA9Q16795 377 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ATAT1Q5SQI0 421 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 NDUFAF5Q5TEU4 345 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 CD276Q5ZPR3 534 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 GLCCI1Q86VQ1 547 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 C1GALT1C1Q96EU7 318 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 SORCS2Q96PQ0 1159 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms