RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 NUDCD3Q8IVD9 361 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 C10orf107Q8IVU9 208 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 DND1Q8IYX4 353 aaKnown RBP7.07□□□□□ -1.28
SGMS1-201ENST00000361543 SLC15A4Q8N697 577 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 FAM13CQ8NE31 585 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 OR4K14Q8NGD5 310 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 RAB3IL1Q8TBN0 382 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 FAM57AQ8TBR7 257 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 KLHL29Q96CT2 875 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 SPACA9Q96E40 222 aaPredicted RBP7.07□□□□□ -1.28
SGMS1-201ENST00000361543 KCNA7Q96RP8 456 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 TTTY12Q9BZ98 90 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 SHCBP1LQ9BZQ2 653 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 GSTO2Q9H4Y5 243 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 ZDHHC11Q9H8X9 412 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 TMBIM4Q9HC24 238 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 VPS29Q9UBQ0 182 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 MEMO1Q9Y316 297 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 PCDHA9Q9Y5H5 950 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 FREM3P0C091 2139 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 NINQ8N4C6 2090 aa7.07□□□□□ -1.28
SGMS1-201ENST00000361543 C2orf92A0A1B0GVN3 265 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 GNG14A0A1W2PPG7 69 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SERTM1A2A2V5 107 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 TMEM114B3SHH9 223 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PCDH7O60245 1069 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ERAL1O75616 437 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PDE9AO76083 593 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ATP1B1P05026 303 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SERPINE1P05121 402 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 BPGMP07738 259 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 FBXO45P0C2W1 286 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 CT62P0C5K7 136 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 CHN1P15882 459 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PORP16435 677 aaPredicted RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PCSK2P16519 638 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 DDX5P17844 614 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 AGAP20933 346 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 CNR1P21554 472 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 NT5EP21589 574 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SERPINB3P29508 390 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 MAGEA5P43359 124 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ALDH9A1P49189 494 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SMSP52788 366 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 MAGOHP61326 146 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 TRA2BP62995 288 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 KCNJ2P63252 427 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ACSM2AQ08AH3 577 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 FUT7Q11130 342 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PCLAFQ15004 111 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 IMPG1Q17R60 797 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SPIN4Q56A73 249 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PRAMEF20Q5VT98 475 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 HLA-DQA1Q5Y7H0 255 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ATG16L1Q676U5 607 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ACSM2BQ68CK6 577 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ARHGAP11AQ6P4F7 1023 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 RNF165Q6ZSG1 346 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 NCCRP1Q6ZVX7 275 aaPredicted RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 DOLPP1Q86YN1 238 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 TAGAPQ8N103 731 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 MMP21Q8N119 569 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SLC34A3Q8N130 599 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 EID3Q8N140 333 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 VWA5B2Q8N398 1253 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 FBXW8Q8N3Y1 598 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ZNF615Q8N8J6 731 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ZNF441Q8N8Z8 693 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 OR7G1Q8NGA0 311 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 OR10G3Q8NGC4 313 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 OR52N2Q8NGI0 321 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PAQR8Q8TEZ7 354 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 PHF10Q8WUB8 498 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 TM4SF18Q96CE8 201 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ATP6V1G3Q96LB4 118 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 FAIM2Q9BWQ8 316 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ACPTQ9BZG2 426 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 BRINP2Q9C0B6 783 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 DEFB127Q9H1M4 99 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 OR10A5Q9H207 317 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ALG2Q9H553 416 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 IL1RL2Q9HB29 575 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SH2D2AQ9NP31 389 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 MID1IP1Q9NPA3 183 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 TUBA8Q9NY65 449 aaPredicted RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 MCM8Q9UJA3 840 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 CES1P1Q9UKY3 287 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 ENTPD4Q9Y227 616 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 WBP11Q9Y2W2 641 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 TIMM22Q9Y584 194 aa7.06□□□□□ -1.28
SGMS1-201ENST00000361543 KLF2Q9Y5W3 355 aaPredicted RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.06□□□□□ -1.28
SGMS1-201ENST00000361543 HCFC1P51610 2035 aa7.05□□□□□ -1.28
SGMS1-201ENST00000361543 PKDREJQ9NTG1 2253 aa7.05□□□□□ -1.28
SGMS1-201ENST00000361543 TMEM120BA0PK00 339 aa7.05□□□□□ -1.28
SGMS1-201ENST00000361543 ENO4A6NNW6 628 aa7.05□□□□□ -1.28
SGMS1-201ENST00000361543 E9PLN8 166 aa7.05□□□□□ -1.28
SGMS1-201ENST00000361543 UBFD1O14562 309 aaKnown RBP7.05□□□□□ -1.28
SGMS1-201ENST00000361543 ADAM10O14672 748 aa7.05□□□□□ -1.28
SGMS1-201ENST00000361543 AZIN1O14977 448 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms