RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ELOCQ15369 112 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 ECM1Q16610 540 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 TCEAL2Q9H3H9 227 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 KLHL21Q9UJP4 597 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 ICMTO60725 284 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF92Q03936 586 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 EXOSC6Q5RKV6 272 aaKnown RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 CREB3L2Q70SY1 520 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 WASH6PQ9NQA3 447 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 IRF6O14896 467 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 ERI3O43414 337 aaKnown RBP12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 LYPLA2O95372 231 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 PRPH2P23942 346 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 PCLAFQ15004 111 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 FAM217AQ8IXS0 508 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 FKBPLQ9UIM3 349 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 SCML2Q9UQR0 700 aa12.65□□□□□ -0.39
SRGAP3-201ENST00000360413 ADAM10O14672 748 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 DCNP07585 359 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 ACVR1BP36896 505 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 TAS2R20P59543 309 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 OR2T33Q8NG76 320 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 OR6C2Q9NZP2 312 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 hCG_1807616A0A1W2PRN6 198 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 VSTM2BA6NLU5 285 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 FPGSQ05932 587 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 CMPK2Q5EBM0 449 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 LINGO4Q6UY18 593 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 ZFP82Q8N141 532 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 CCM2LQ9NUG4 571 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 PTNP21246 168 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 CPT2P23786 658 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 FABP6P51161 128 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF33AQ06730 810 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 RNF130Q86XS8 419 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 P2RY13Q9BPV8 354 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 EVLQ9UI08 416 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 KIF13AQ9H1H9 1805 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SERPINA7P05543 415 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SHMT2P34897 504 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC27A4Q6P1M0 643 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 DCP2Q8IU60 420 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 IRF7Q92985 503 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 MEIOCA2RUB1 952 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 GK3PQ14409 553 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SLBPQ14493 270 aaKnown RBP eCLIP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 RSU1Q15404 277 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 HIST2H3PS2Q5TEC6 136 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 PAQR3Q6TCH7 311 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 ST7LQ8TDW4 575 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC45A3Q96JT2 553 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 OR51J1Q9H342 316 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 GPN2Q9H9Y4 310 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 HEBP1Q9NRV9 189 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SMOXQ9NWM0 555 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 INSL6Q9Y581 213 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 CABIN1Q9Y6J0 2220 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 POM121CA8CG34 1229 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SYPP08247 313 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 H2BFMP0C1H6 154 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 HADHBP55084 474 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 GINS1Q14691 196 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 ZC3H14Q6PJT7 736 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 ENPP7Q6UWV6 458 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 OR56A3Q8NH54 315 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 DEFB118Q96PH6 123 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 BCL7BQ9BQE9 202 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 NTN4Q9HB63 628 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 TXNL4BQ9NX01 149 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 B3GALT1Q9Y5Z6 326 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 TNFSF12O43508 249 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 SEC14L2O76054 403 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 AMY2AP04746 511 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 NANOGP8Q6NSW7 305 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 KLBQ86Z14 1044 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 MFFQ9GZY8 342 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 NANOGQ9H9S0 305 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 DZANK1Q9NVP4 752 aa12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 UBE2J1Q9Y385 318 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-201ENST00000360413 A0A1W2PPL8 197 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 ARGFXA6NJG6 315 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 NPC1O15118 1278 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TMEM63AO94886 807 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 ETV6P41212 452 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SEC13P55735 322 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TMEM41BQ5BJD5 291 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 RAB7BQ96AH8 199 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TMX2-CTNND1H3BSU7 103 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SOCS5O75159 536 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms