RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FBLIM1Q8WUP2 373 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 RELTQ969Z4 430 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 MSANTD3Q96H12 275 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 DPCDQ9BVM2 203 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SPATA5L1Q9BVQ7 753 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 SRRQ9GZT4 340 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 C1GALT1Q9NS00 363 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 TNFRSF10DQ9UBN6 386 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 CCL26Q9Y258 94 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 ANKRD36A6QL64 1941 aa6.23□□□□□ -1.41
CSDE1-203ENST00000358528 DAPL1A0PJW8 107 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 HYKKA2RU49 373 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 J3QLW9 94 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ERI3O43414 337 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ICMTO60725 284 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 GCM2O75603 506 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 HLA-DPB1P04440 258 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 GNSP15586 552 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF19P17023 458 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 BMP7P18075 431 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CBLP22681 906 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 DDOSTP39656 456 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 RFX2P48378 723 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ANXA11P50995 505 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TLE2Q04725 743 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 FAPQ12884 760 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 GPR50Q13585 617 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CDKL4Q5MAI5 379 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 MEDAGQ5VYS4 303 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CST9Q5W186 159 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 FCRLBQ6BAA4 426 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SLC8B1Q6J4K2 584 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ANKRD54Q6NXT1 300 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SLC36A4Q6YBV0 504 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 MTSS1LQ765P7 747 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 KLHL36Q8N4N3 616 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 RAB42Q8N4Z0 105 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 FIBINQ8TAL6 211 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PIGXQ8TBF5 258 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CD99L2Q8TCZ2 262 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TM9SF4Q92544 642 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 QRFPRQ96P65 431 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TREX2Q9BQ50 279 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CDCA4Q9BXL8 241 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SLA2Q9H6Q3 261 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 BRF2Q9HAW0 419 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TNS1Q9HBL0 1735 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CUEDC1Q9NWM3 386 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 MRPL39Q9NYK5 338 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PRELID1Q9Y255 219 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 A0A075B6Q4 140 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 C1orf226A1L170 272 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TNFRSF10AO00220 468 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 POLR1CO15160 346 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TEX28O15482 410 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 AKAP8O43823 692 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CXCL14O95715 111 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SLC35G4P0C7Q5 338 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CLCNKAP51800 687 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 CRYBA2P53672 197 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PPP3R1P63098 170 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SP3Q02447 781 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 MLLT11Q13015 90 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ADAM15Q13444 863 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 KCNC3Q14003 757 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 POU4F3Q15319 338 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 GPR68Q15743 365 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF750Q32MQ0 723 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 BICRALQ6AI39 1079 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TCTN3Q6NUS6 607 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TMEM107Q6UX40 140 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ADAMTS15Q8TE58 950 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 OVCA2Q8WZ82 227 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 AKAP1Q92667 903 aaKnown RBP eCLIP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 C12orf66Q96MD2 445 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SAP130Q9H0E3 1048 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ELAC1Q9H777 363 aaKnown RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 NUDT15Q9NV35 164 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 GPATCH2Q9NW75 528 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 IL36AQ9UHA7 158 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 MGAT4AQ9UM21 535 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 SPTBP11277 2137 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PRAMEF25A6NGN4 478 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PCP4L1A6NKN8 68 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 HRO43593 1189 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 UGDHO60701 494 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF821O75541 412 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-203ENST00000358528 ALX3O95076 343 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 NTN1O95631 604 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 NPPBP16860 134 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 MMP11P24347 488 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 HOXD10P28358 340 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PUM1Q14671 1186 aaKnown RBP eCLIP6.22□□□□□ -1.417e-7■■□□□ 11.5
CSDE1-203ENST00000358528 ZNF79Q15937 498 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 TPGS2Q68CL5 300 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 PGBD2Q6P3X8 592 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 UNC5DQ6UXZ4 953 aa6.22□□□□□ -1.41
CSDE1-203ENST00000358528 GAREM2Q75VX8 874 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms