RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ZER1Q7Z7L7 766 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 JAGN1Q8N5M9 183 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TRIB2Q92519 343 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SUSD3Q96L08 255 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 LHPPQ9H008 270 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SDHAF2Q9NX18 166 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 COL1A1P02452 1464 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 FAM170BA6NMN3 283 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 HLA-DQB2P05538 268 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 HMGCLP35914 325 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 GPR176Q14439 515 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PAQR3Q6TCH7 311 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 MFSD6LQ8IWD5 586 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CCNL2Q96S94 520 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TREX2Q9BQ50 279 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 XYLT2Q9H1B5 865 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PPIL3Q9H2H8 161 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PCDHB10Q9UN67 800 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 DOCK4Q8N1I0 1966 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CXorf51AA0A1B0GTR3 108 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 EEF1E1O43324 174 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PNMTP11086 282 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 AFF3P51826 1226 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PRKAG1P54619 331 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF266Q14584 549 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 NANPQ8TBE9 248 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 COQ8BQ96D53 544 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 LRR1Q96L50 414 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF705EA8MWA4 302 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TBL1XO60907 577 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ADAM23O75077 832 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 HLA-HP01893 362 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ALPLP05186 524 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 NCK1P16333 377 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 GHRHRQ02643 423 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SLC18B1Q6NT16 456 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SHFQ7M4L6 423 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 GOLGA7Q7Z5G4 137 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 HASPINQ8TF76 798 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 RAB39BQ96DA2 213 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF175Q9Y473 711 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 POLR2CP19387 275 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CREB5Q02930 508 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 RBM39Q14498 530 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PLK5Q496M5 336 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 RNF113BQ8IZP6 322 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SLC5A11Q8WWX8 675 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 C5orf34Q96MH7 638 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ELF4Q99607 663 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM121BQ9BXQ6 578 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 EBF1Q9UH73 591 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 LRP5LA4QPB2 252 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 VSTM5A8MXK1 200 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 HRGP04196 525 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PSMD8P48556 350 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 GDF10P55107 478 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 VLDLRP98155 873 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TAF10Q12962 218 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CDK5R2Q13319 367 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 APOFQ13790 326 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 FAM117BQ6P1L5 589 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CPA6Q8N4T0 437 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 FRS2Q8WU20 508 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 NINJ1Q92982 152 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ZBTB45Q96K62 511 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SYT17Q9BSW7 474 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 RXFP3Q9NSD7 469 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 BCKDHAP12694 445 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OSMP13725 252 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OR52N2Q8NGI0 321 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OR5P2Q8WZ92 322 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SPOCK3Q9BQ16 436 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 QRSL1Q9H0R6 528 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM185BQ9H7F4 350 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ACSL6Q9UKU0 697 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 A0A1W2PPL8 197 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OR5K4A6NMS3 321 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SYT5O00445 386 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SCDO00767 359 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 T-ENOLP0DO92 83 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 EDNRAP25101 427 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PBLDP30039 288 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 DBPQ10586 325 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SEZ6Q53EL9 994 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 IGFN1Q86VF2 1251 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OR2AP1Q8NGE2 309 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ZFAND1Q8TCF1 268 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 LYSMD1Q96S90 227 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 GPR20Q99678 358 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ABI3Q9P2A4 366 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TRDV1A0A1B0GX56 115 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TAAR5O14804 337 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 AHSA1O95433 338 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OPRL1P41146 370 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PPT1P50897 306 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 MEP1AQ16819 746 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 MINDY4Q4G0A6 757 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms