RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 CCDC116Q8IYX3 515 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 OR2M7Q8NG81 312 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 OR6Y1Q8NGX8 325 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.81■□□□□ 0.6
CHRD-203ENST00000356534 PAQR8Q8TEZ7 354 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 HSPBAP1Q96EW2 488 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 FCRL1Q96LA6 429 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 KCNK9Q9NPC2 374 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 TAS2R7Q9NYW3 318 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 NPIPA1Q9UND3 350 aa18.81■□□□□ 0.6
CHRD-203ENST00000356534 SETXQ7Z333 2677 aaKnown RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 NUP214P35658 2090 aaPredicted RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 PHF3Q92576 2039 aaKnown RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 PIP5K1BO14986 540 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 LSM1O15116 133 aaKnown RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 HSPA4LO95757 839 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 LINC00032P0C843 101 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 DHRS4L1P0CG22 281 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 S1PR1P21453 382 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 GPX3P22352 226 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 KIAA0040Q15053 153 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 ZNF628Q5EBL2 1059 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 BEND6Q5SZJ8 279 aaPredicted RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 FAM111BQ6SJ93 734 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 Q6ZSR9 355 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 TICAM1Q8IUC6 712 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 EID3Q8N140 333 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 FBXW8Q8N3Y1 598 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 FAM13CQ8NE31 585 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 ADCY4Q8NFM4 1077 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 ADIPOR1Q96A54 375 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 SECISBP2Q96T21 854 aaKnown RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 TUBB1Q9H4B7 451 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 SUCOQ9UBS9 1254 aaKnown RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 ERRFI1Q9UJM3 462 aaPredicted RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 BOKQ9UMX3 212 aaPredicted RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 NPFFR2Q9Y5X5 522 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 NCKAP5O14513 1909 aa18.8■□□□□ 0.6
CHRD-203ENST00000356534 NCOA6Q14686 2063 aaPredicted RBP18.8■□□□□ 0.6
CHRD-203ENST00000356534 ZNF354AO60765 605 aaPredicted RBP18.79■□□□□ 0.6
CHRD-203ENST00000356534 COQ9O75208 318 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 CBX7O95931 251 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 IFI6P09912 130 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 CCL3P10147 92 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 NAGAP17050 411 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 RPL3P39023 403 aaKnown RBP18.79■□□□□ 0.6
CHRD-203ENST00000356534 DUSP2Q05923 314 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 MGAT2Q10469 447 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 LTB4RQ15722 352 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 CHI3L2Q15782 390 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 GALNTL6Q49A17 601 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 ATP6AP1LQ52LC2 224 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 LYPD8Q6UX82 237 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 OR52R1Q8NGF1 315 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 OR2T11Q8NH01 316 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 AGR3Q8TD06 166 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 LCORQ96JN0 433 aaPredicted RBP18.79■□□□□ 0.6
CHRD-203ENST00000356534 PKNOX2Q96KN3 472 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 TSPAN10Q9H1Z9 355 aaPredicted RBP18.79■□□□□ 0.6
CHRD-203ENST00000356534 IL1RL2Q9HB29 575 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 PTGDR2Q9Y5Y4 395 aa18.79■□□□□ 0.6
CHRD-203ENST00000356534 MYO1GB0I1T2 1018 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 TMEM233B4DJY2 109 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 PLOD3O60568 738 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 SLC19A2O60779 497 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 TBX19O60806 448 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 LDLRP01130 860 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 ABOP16442 354 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 PCSK2P16519 638 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 NCBP2P52298 156 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHRD-203ENST00000356534 MRPS35P82673 323 aaKnown RBP18.78■□□□□ 0.6
CHRD-203ENST00000356534 MAD2L1Q13257 205 aaPredicted RBP18.78■□□□□ 0.6
CHRD-203ENST00000356534 EXOSC7Q15024 291 aaKnown RBP18.78■□□□□ 0.6
CHRD-203ENST00000356534 UGT3A2Q3SY77 523 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 XKR7Q5GH72 579 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 HHATQ5VTY9 493 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 R3HCC1LQ7Z5L2 792 aaKnown RBP18.78■□□□□ 0.6
CHRD-203ENST00000356534 OR9A2Q8NGT5 310 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 ZFP28Q8NHY6 868 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 RELTQ969Z4 430 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 MTERF3Q96E29 417 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 ITPAQ9BY32 194 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 TTTY12Q9BZ98 90 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 SH2D2AQ9NP31 389 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 DEPPQ9NTK1 212 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 TAS2R9Q9NYW1 312 aa18.78■□□□□ 0.6
CHRD-203ENST00000356534 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.78■□□□□ 0.6
CHRD-203ENST00000356534 CHCHD2Q9Y6H1 151 aaPredicted RBP18.78■□□□□ 0.6
CHRD-203ENST00000356534 A0A087WV62 115 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 TRGV8A0A0C4DH27 118 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 PDPK1O15530 556 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 LRRTM2O43300 516 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 HS6ST1O60243 411 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 SDC1P18827 310 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 CA7P43166 264 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 PPICP45877 212 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 ABCE1P61221 599 aaKnown RBP18.77■□□□□ 0.6
CHRD-203ENST00000356534 KCNJ2P63252 427 aa18.77■□□□□ 0.6
CHRD-203ENST00000356534 TRMT12Q53H54 448 aaKnown RBP18.77■□□□□ 0.6
CHRD-203ENST00000356534 RNFT1Q5M7Z0 435 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms